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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoBR_DN30702_c1_g2_i6
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		RNA-binding_protein_4.1_isoform_X2_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0007067 P mitotic cell cycle
GO:0007303 P cytoplasmic transport, nurse cell to oocyte
GO:0007562 P eclosion
GO:0007623 P circadian rhythm
GO:0008062 P eclosion rhythm
GO:0008104 P protein localization
GO:0008270 F zinc ion binding
GO:0009790 P embryo development
GO:0030036 P actin cytoskeleton organization
GO:0040011 P locomotion
GO:0045475 P locomotor rhythm
GO:0045804 P negative regulation of eclosion
GO:0045995 P regulation of embryonic development
GO:0046872 F metal ion binding
GO:0048511 P rhythmic process
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
Transcript
Level		FPKM:0.00 TPM:0.00
ORF EntryO_BomoBR100549_complete:A_BomoBR_DN30702_c1_g2_i6
Sequence
(Nucleotide)
TCTTACTTTAATTGCGTCGGGTGACTTGAGACTAGTGCGCTCGTTTTTTTTAAATATTAA
CGTAACATTTAATAGACATAATTTCTTGGAAGTGATATAAATCAGTGATCATGGTGCCGC
AAACGAAGGTGTTCGTCGGCAGCCTGCCGCAGGGCTCCAAACCGGAGGACCTAAGAAAGC
TGTTTGAGCGTTTCGGCGTCGTCACAGAGTGTGATATAATGAACCGGTGCGGGTTCGTGC
ATATGCAGACAGAGGAACAAGCGGCAGCGGCGATTCGCGCGCTTCATAACTCTACATTTA
ACGGCGGCGTTATATCCGTGGAGCGCGGTCGCATCAAAGAACGCGGGCAGCGTGGGGGCG
GTCGCGGTGGACGAGGTTCCATGCGCGGTGGCATGGAGCGTCGCGGAGGCGGCCCCGTGC
GACACGCGCCCCCGCCTCGGGACGCACCATACATGAGGGACCGGCCAGGTCCGGTGCGCG
GCTACGAACGCGGTCCGCCGGCGGCGCCCTATGACGAGCGCTATGCGTACGGCGAGGACC
GGCGTGGGTTCGCGCTGATGGATCGCGGCCCTAGGGACGCTTATGCACCGCCGGCGCCTG
CTTACCCTGACGAACGCTACCAGAATCACATCTCAGTGGTGGAGGGTACGCGACGTTACG
ATGAGCCTCCCTATGACGACCGCCACTACGACGAGCGCGCACAGTATGAACGCCCGAGAC
CTGCTCACCACATACCTAACGGGGACATGTACAGCCGAAGATCACCTGCCCCCATGTATT
CCGGGCGTGGAGGTCCAGCTCCAGTGGCCGGAGGTTACGAGAGAGATCACTATGTACCAC
AATACATGCAACCTCCATTGGGACGGTGAGTTAAAGAAAACTATATTTTACTTATGAGCT
GGCAAGTGAACAGTGATATAAATAAAAAACCAGAAGCTATAAAAAAATAGAATGATTACC
ACACAGAAATACACTAGCATTACTTTATTTTGTGTGGCTTAAAATGGGACCTAACATTTT
TTGCTTTGGGTGTTGTAAGAATCGTATACAGGATTCACCAGAGAATGAATTCTTGGCCAT
CACACCAGCACTGCTATTCTTTTTATTGCTGTTAGGGGTTATTGGCAAAGTCGCAAGTAT
ATCATGTGTATTCTCGATGTGGAGAAGTTGTGTGTTCCAGTTGGAAGGGTGAGACAACCA
TTTTATAAAACAAGTCTTTGTAGGTTTCTGCACAGCAGCCTAACAATGAATCCACAAGAT
TGTCTAAAGTTTATCAACTGGAAAGCTTTCGATTTAAAAAAAAGTTACATGTTGCAATTT
TAGACCCATTTAATGCATATAGAACCACAGGTCTTATTTAGAAATTTATAATTACCACAA
TAGATTCTATGAATAATGAAATTACTGCTAATATTAGACAATAGTAAGAAGTACTCAATA
ACACTTATAAAATGCTACAGTAGGATATTTGCTAATTGTACTAACAAACAAATCTGGTTG
TAGCTATACATTTTCGTCAACCATATTAGTACTGAAATTTGGCAATTATCTCATCAATGT
TTGTTCTGTAGAGTGGAAAATTAATTGACAAAATGGAAAATTTGAATATTGCTGCCCACA
TTATCAAAACCCCATTTTATTTGTACTAACAGCTAATGCTCCTAATATTCAAAGTGGATT
TACTGAACACAAACCACTTTCAATACAAAGAATTGTTTTTATTTATTTATTAAAAAAATA
GATTGCTACTCTATCTCAGGGATTCCCGAACTATTTTGGGAAAGAGACCCTATTCCAAAT
TCAGATCAATGTAGACTTTAAGACTTTAAAAATCTCTAGTTTTAATTCCTATGAAATACT
TATCAAATACTTATCAATTTAGGAACTTTCCAGTTGGTTAATTGAGTAAATTTGACATAT
TTTATTTTCTCATCAAAATTGGTACACATAACACAACTTATACTGTGCCTTTATAAGTTT
TAAACAGGAACTTGTGTTAATTAATAGAGGTTGATTTGAAGACCTTGTCGACGCCACCTA
AATCAGTTTTCATTTAATATGTCGACCCCTGGGAAACCGTAGACCCCTTGGGGTGATAAT
GTCCACTTTGGCAATCCCTGCTTTCAAGTATGTCCTAGTCACTTGTTCACTTGCCAGTTG
AAGATCGTATAGAACGAAATGATAAGTACTGGTATGCGTTGAGTGTGAGAAGTTCCCAAT
AAGTCTTTCTAATTTTAAATTAAAGAATAATGACCATTTTCATACTGAGGGTGATTTCGG
TGATACTGTTATTTTATCTGATCTTTCGGACACTAGTGTACAAGTGAATGTTTTTTAATA
AGCTGCAATAATTTCATAAAACCCCCTTCATATACCTATATCAAGGCTGTGCAAGTTATG
GATGTTTATGGCCGAAAATTACATGAAATGCCTTTTCACATCTTTAATGAAAACTAAATG
CTAGAACACTTATACAAAATTAGTTATTTAATTTTCTCTTTATTGCGTTACGAATTTTAA
ATGTTAAACACTCTTAAGGGTCGCACTAATTTGAGACCGCATGCGGGTCACGTTTTGCAT
AGCCCTGCTCTAGAAAGTTGTTTGTACAAAAAAAGCAAGGATCTTACGAAAATTGTTTGT
GTTAATTTCAATGAACATAACAAAACTTTTTAGGATCTGGTGAACAATATATAACTAAAA
GAAACTGATGAAAAAGACCTTTTGACGATACTACTAGAAAACAACTACTAACTGCAAGAA
AAATATAACGAAGGGATATATAATAAATCGGAATTAATCGATGTGTGTTTACCTTAAAAG
AAAGTTTAGTACACTGCTTAATTTCTAAATAAAATGGTCATTTTTTTTAATATTGTACGG
AACCGTTGGACGCCTCTCTGAGTATAGTGGAAATAATGTGTTAGACATGTCGATATAACT
GATGCGTGCGTCGATGAAGCGATGAGCGACAAGGGAGGGCGCTGGTCCACTATAAGCCGA
GCGGGTGTCGGTTGTGTCGGGGCTGATGGCTCACGGTGTGTGTTGTGTGTAGCGGGGGCG
GAGCGCCACGGGGCCGCGACATGTCCGGGGGCGTCGGCCCGCGCCGGTACTAGCCGCCAC
TGACCACGAACTTCAGGACCACACGTCTATAGTCTATAAGTTAATTAGAATTATGTCAAT
CGTTTTTTAATTAAATAAATGAGAACAATCAAGACGAATCGCCTTCATTTTGTAACAAAC
CTTATGTTTTTGACGTAAGACGCAGATTAGGTTAAATCAATTATATGATGTTGACGTTCT
TCCCTAGAAAAAATGTAAAAATATACTTGTTTCAAAATGTAATTGTCTATCTGTGGAATT
AAAATCGTTAATGAATCGAAAGTTTTCACTTATATATACACATCCCCGAAGATCGGAAGA
GCGTCGTGTA
(3430 bp)

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