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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c9683_g1_i1
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		cullin-4A_[Bombyx_mori]
Ontology
GO:0003684 F damaged DNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006281 P DNA repair
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0016567 P protein ubiquitination
GO:0031175 P neuron projection development
GO:0031461 C cullin-RING ubiquitin ligase complex
GO:0031465 C Cul4B-RING E3 ubiquitin ligase complex
GO:0031625 F ubiquitin protein ligase binding
GO:0035518 P histone H2A monoubiquitination
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0045732 P positive regulation of protein catabolic process
GO:0061630 F ubiquitin protein ligase activity
GO:0070062 C extracellular exosome
GO:0070914 P UV-damage excision repair
GO:1900087 P positive regulation of G1/S transition of mitotic cell cycle
Transcript
Level		FPKM:22.64 TPM:17.36
ORF EntryO_BomoASG1578_complete:A_BomoASG_c9683_g1_i1
Sequence
(Nucleotide)
TGGTGGTGAACCAGTAAACTATTGACTGAGCGGAATTATTTTTATTTGTTTTCTAGATAA
TCTAGTTTAGAATTTCATTGTTTAAGTGTAGTGGCTGCGGCCATATCATGCTTGCTTATG
TCGGGATTAGCTGAAACTCCTATTTCTGCCAAAGAAGGCGGTAATCTGTATAAAAAACGA
TCACTGCCTGTCAGCGAATCGTGTAGCAAAAGAGTGAAAATCAACGAAATGAGCGCAGAG
GAGAAAATATCAAATTTTTCGCTAGTGAATCCAAATTCTAACGGGATAAAGATGTCATCA
ACATCAATGAACAAGCCTGGCGTTACTGCAAAAAAGCTGATAATTAAGAATTTCAAAAGT
AAACCGAACCTTCCAGACAATTATCAGGAAACGACATGGAGCAAGCTGCGGGAAGCTGTT
GTCGCCATTCAGACCTCAAAATCGATAGCCTATTCCTTAGAAGAATTATATCAAGCCGTC
GAAAACATGTGTAGTCATAAGATGGCTTCACAGCTTTATGTTAACTTAACAAACTTGGTG
GAAGCTCATGTGAAAGCCAACATCGAGCAGTTCTTGTCCGAGAGCATGGACAGACAGGTC
TTTCTAAAGAGGATGGACGACTGCTGGCGAGCTCACTGCCGACAAATGATTATGATTAGA
AGCATTTTTTTATATTTAGACCGAACCTATGTCCTTCAAAACCCTAGTATACATTCAATT
TGGGACATGGGCCTAGACCTGTTTCGTCACCATATAGCAATGAATACACTTGTCCAGACT
CGTACAGTAGATGGCCTCTTATTACTTATTGAACGTGAGCGAGGAGGTGATTCAGTAGAT
ATATCTTTGCTGAAGAGTCTTCTACGTATGCTCTCTGATCTACAAATATATCAGGAAGCA
TTTGAGCATAAATTCCTTCAAGCAACTGAAAGGCTGTACGCTGCAGAAGGACAACGTTTG
ATGAGGGAACTGGCAGTTCCTGAATACCTTGCCCACGTAGAGAAAAGACTTAAAGAGGAG
AATGATCGCCTTTTACATTATCTGGACCCATCAACCAAATGGCAACTGGTGGTGGTAGTA
GAGAGACAGTTGCTGGGTGAACACGTGGCCGGGATACTCGGTAAGGGCCTGGCTGCATTG
TTGGACGCACCACGACTGCATGACCTGGCCACACTCTACACACTGTTCTCCAGGGTTAAG
GATGGCCTGGCTGAACTTTGTCATCATTTCAATGGTTACATCAAGAAAAAAGGAAGAACG
ATAGTAATAGAGCCAGAGCGAGACAAGACAATGGTAACCGAGCTACTCGACTTCAAAGAA
CAACTGGACCATGTAGTCAACACTTGCTTCCAGAGAAATGACAAATTCATATACTCTATG
AGAGAAGCCTTTGAATTCTTTATTAATCAGAGGCAGAACAAACCTGCTGAATTAATTGCC
AAATTTGTGGATCTAAAATTGAGGGCCGGTAATAAAGAAGCAACTGAAGAAGAATTAGAA
CGTCTGCTAGACAAGATAATGGTTTTGTTCCGTTTCATACACGGCAAGGATGTTTTTGAA
GCTTTCTATAAAAAGGATCTAGCAAAGAGATTGCTAGTAGGTAAATCTGCATCGGTGGAC
GCTGAGAAGTCGATGCTTAGTAAACTGAAGCAAGAGTGCGGAGGTGGCTTCACCTGTAAA
CTAGAAGGAATGTTCAAAGATATGGAGCTATCTAAAGATATCAATATTACATATAAGCAG
CACCTGTCAGCTAGTACGGAGACGAGCGGTCCTGGCGGCGTGGAGCTGTCCGTTCACATC
CTGACGATGGGCTTCTGGCCGACGTACCGCGCCTGCGAGGTGCGGCTGCCCACGGAGCTG
ACGCGGCAGCAGGAACACTTCACCAAGTTTTACCTCGCGAAGCACTCGGGTCGGAAACTG
CACTGGCAACCCACGCTCGGACACTGCGTGCTCAGAGCTAACTTCGCACAGGGTAACAAA
GAGCTACAGGTTTCGTTATTCCAAGCTCTGGTCCTGTTATTGTTCAACGATGGAGACAAT
CTCTCTTTTGAAGACATTAAGGTTTCCACCAATATAGAGGAGGGAGAGCTCCGCCGCACG
CTGCAGTCCCTGGCGTGCGGCAAGGCGCGCGTGCTGAGCAAGGCGCCGCGCGGTCGGGAC
GTGCAGGACCTCGACCACTTCTCCTTCAATGCGGACTTCACCAACAAGCTGTTCCGGATC
AAAATCAACCAGATACAGATGAAGGAGACGAGCGAGGAGCAGAAGGCGACGGAAGAGCGC
GTGTTCCAAGACAGGCAGTACCAGATCGACGCGGCCATCGTCCGGGTCATGAAGATGAGG
AAAGCGCTCTCGCACAACCTCCTCATATCCGAACTGTACAACCAGCTCAAGTTTCCGGTT
AAGCCCTCCGATTTAAAGAAGCGCATAGAGTCCCTGATCGACCGCGACTACATGGAGCGC
GACAAGGACAACCCGAACCAGTACAACTACGTGGCGTAACAGCAGTCCAGCGACGTCGCT
TTAACGAAAATATTATTTATTTAAAACGGTTATTGTGTCTGCGGGCACCTCCCTCCCAAC
CCCCCCATGCACGCCACCCGCAGCGCGCACTCGCCGCGAGTGGTTAGCCAGGCCATACAC
AGCTCCAGTCAACAACTTCACTAATCTTTAGGAAATAATATATATGTATGTACATATTAT
ATAAATAAATATAAAAATAACGTATTTTACGCACGACGGAATAACTATAATTCGTTTTCT
CCTAAAGTCACAAACCGTACCGTTGTTTGTCCTGTGTGCCCCGCTTCTGACGATCCCGTT
ATGGCCTTTAGTCACTTTAGTCATTGTGGTTGAAACTTTGAAGTGCAGAAGTTGTTCGCT
GCGAGCTGTAATAAATTCCCCCTATCGTTTGTGAATAATTTGATACTTCTGTCCGCTGAA
CGCATATAACGGTTGAAACAGTTTCGAGTCGTGTCGTCCGTAACTGCTACTTCCAACGTC
TTAAGTTTTTCAGCAAACCCCGAAAAAGTGGTGAAAAGTGTGCAGCAAAAATGTTAAAAA
TACATTAATAATAAAACTTTTTTTTACCTAAAAAAAAAA
(3099 bp)

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