SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c8193_g1_i1
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		26S_protease_regulatory_subunit_6A-B_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000502 C proteasome complex
GO:0000932 C P-body
GO:0001824 P blastocyst development
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008540 C proteasome regulatory particle, base subcomplex
GO:0016020 C membrane
GO:0016787 F hydrolase activity
GO:0017025 F TBP-class protein binding
GO:0022624 C proteasome accessory complex
GO:0030163 P protein catabolic process
GO:0030433 P ubiquitin-dependent ERAD pathway
GO:0031595 C nuclear proteasome complex
GO:0031597 C cytosolic proteasome complex
GO:0036402 F proteasome-activating activity
GO:0045899 P positive regulation of RNA polymerase II transcription preinitiation complex assembly
GO:1901800 P positive regulation of proteasomal protein catabolic process
Transcript
Level		FPKM:80.18 TPM:61.50
ORF EntryO_BomoASG1359_5prime_partial:A_BomoASG_c8193_g1_i1
Sequence
(Nucleotide)
GTGTGCTCTTCCGATCTCGTCAAATGTGTATGGGTTCAAGAACTTCTTAATTTAAAAGAT
TACTACGAAAAAACAAATCATAATATTACAATGGCCACAACATTAGAAGACAAGTCAATT
TGGGAGGATGGCGAGGAAGCTCTCAGTGAGGAAGTTCTTCGCATGCCAACTGATGAAATC
GTAAGTCGAACCCGACTTTTGGACAATGAAATCAAAATAATGAAGAGCGAAGTGATGAGG
ATCTCGCACGAGCTGCAGGCTCAAAACGATAAAATTAAAGAAAACACGGAGAAAATCAAG
GTCAATAAGACGCTACCATATCTCGTATCGAACGTCATTGAACTTTTAGATGTGGATCCG
CAAGAGGAGGAAGAAGACGGCGCCGTTGTCGATCTAGACTCACAGCGTAAAGGGAAATGC
GCTGTAATCAAGACTTCAACCCGGCAAACATATTTCTTGCCCGTCATCGGCTTGGTAGAT
GCAGAGAAACTCAAACCAGGAGACTTGGTAGGAGTCAACAAAGACTCTTATTTGATCTTA
GAAACGCTCCCAGCGGAGTATGACGCCAGAGTAAAGGCAATGGAGGTAGATGAGAGACCA
ACTGAACAATACTCAGATATTGGAGGTCTGGATAAACAGATACAGGAATTAATTGAAGCT
GTAGTGTTGCCAATGACACACAAGGAGAAATTTGTGAATCTCGGCATCCACCCACCCAAA
GGAGTTCTTTTATATGGACCTCCTGGTACAGGGAAGACATTGCTGGCGAGAGCTTGCGCT
GCTCAAACAAAGTCTACATTTTTGAAGCTGGCTGGTCCACAACTTGTGCAGATGTTCATT
GGTGATGGTGCCAAGCTTGTCCGCGACGCCTTTGCATTGGCTAAAGAGAAGGCACCAGCA
ATCATCTTCATTGATGAACTGGACGCTATTGGTACAAAGCGTTTTGATTCAGAAAAGGCT
GGAGACCGTGAGGTGCAGCGTACTATGTTGGAGTTGTTAAACCAGCTTGATGGGTTTAGC
TCAACTGCTGACATCAAGGTCATTGCAGCTACCAATAGAGTGGACATTTTGGACCCTGCC
CTGCTCAGATCTGGACGTTTGGACCGAAAAATCGAATTTCCTCATCCCAATGAAGAAGCC
CGAGCCAGAATTATGCAGATCCATTCCCGTAAAATGAATGTAAGTCCAGACGTTAATTTC
GAAGAACTGTCGCGTTCGACTGATGATTTCAATGGCGCCCAGTGCAAGGCGGTCTGCGTC
GAAGCTGGTATGATAGCGCTGCGACGTTCAGCAACTGCCGTCACTCACGAAGACTTTATG
GACGCCATACTGGAGGTCCAGGCTAAGAAAAAGGCCAACCTTAGCTATTATGCTTAGTTG
TATTAAATATAAATAATTTGTATAAATAAAAATTTACT
(1418 bp)

- SilkBase 1999-2023 -