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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c6605_g1_i2
Scaffold_idBomo_Chr18
NCBI non-redundant
(nr)		activating_transcription_factor_3_isoform_X2_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000976 F transcription cis-regulatory region binding
GO:0000977 F RNA polymerase II transcription regulatory region sequence-specific DNA binding
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000982 F DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0001078 F DNA-binding transcription repressor activity, RNA polymerase II-specific
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006094 P gluconeogenesis
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0010628 P positive regulation of gene expression
GO:0030968 P endoplasmic reticulum unfolded protein response
GO:0034198 P cellular response to amino acid starvation
GO:0035914 P skeletal muscle cell differentiation
GO:0042802 F identical protein binding
GO:0042803 F protein homodimerization activity
GO:0043565 F sequence-specific DNA binding
GO:0044212 F transcription cis-regulatory region binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0070373 P negative regulation of ERK1 and ERK2 cascade
GO:1903984 P positive regulation of TRAIL-activated apoptotic signaling pathway
GO:1990440 P positive regulation of transcription from RNA polymerase II promoter in response to endoplasmic reticulum stress
GO:1990622 C CHOP-ATF3 complex
Transcript
Level		FPKM:29.27 TPM:22.45
ORF EntryO_BomoASG1119_complete:A_BomoASG_c6605_g1_i2
Sequence
(Nucleotide)
GGTACACGCGGTATCGACGTGTGCGTGTGTTGTCGAGGCGCGCACTCTGTTTACAGCGCG
GCGGTGTGGCCGGCAAGCGCACGCATCCGACTCGTTTATATCGCGCGGTACCGATTTCCC
TGACGGCTTCCGAGCTGCATCAGCATATCTGGTGTTTTCCTCACTACTCACCAATCGTCA
CAAGTGACAGACATACCGAAAACCGTCAGTCGGCTAACGTACATCGCGTACCATAGAGAA
GTTTCAGCGCGGCTCATAAAAATTCGGTGTTTTCGACGGATGCGATGAATAAATTTTGCA
AATCGAGTTTGTGTGTCGAAAAGGTCCGTGAGAGCAATGTTTTGATCGGCCGGCTGGAAG
TGGAAGTGCCGGGTTGTGTGGACGCGATACGATTCGCGATTATCTTGATCTGTGTGAAAT
TAAGGTTTTTTCGGGAGGTGCTCGACCGAGTCTTCCACAAGGAGGCGGCCTGGAGTCCAG
CCACGGCGTCTCCGGTCAGCCCCGCGCTTAGCACGTGCTAAGGTCTAATTACAAAAGTTA
CCCGTGAAGACTTCTGTTAGAGGAGACTTTCAAGTGCCATTCGTACCCAGTTTACCAGAC
AGTGATTTAGTGATAGTGTTTACCCGTGATATTTAGACTTAGTCTAAAGTGTTAGTACCA
ATAATTTTGTTTGAAAAGTTACCAAAATAAAATAAAATAAAAAAACAACAAAACTGGCTC
CTTACAAGGATATAATGAACGCAACGAGCATGAGCTCTACTATACCGACAATTAAATGTG
AGGATACATCGCCATCGCCGGTTGCTTTAGGATCTGACGGAGAAAGTGGAACGTACAATT
TGAGTGTTAATGTGAATCTAAGTGCTGCTATGATAAACATGCTGACCGCCGAGGGAACAA
ATACTACGCTTCGTACGCCGGAGATTGTAAACGATGTCATCACCATGACAAACCCCCTGG
ACCAGTATAATTACGAAAAGAATTCCAGTTTCAAGAACGGAAGCGGAAATGACTCCAACT
CTTCGATGTCTAATGGCTCGTCGGCCACATCACCGTCTTCAAGCACTCCGCCCAGCATAC
AGAAGACGTGCTCGGAACTTATCAAGGCTGGCCTGAAACTGTCCATTGAATCGAAACGCA
AAATGTCCGGTAGCGATACAGACGTCAGCGTGAAACGACTCAAAAAGGAAGAAAGCGATG
AAGATTACGATAGCAGTCACACGCAACAAGCCAAAAATGAAGGGCTAACACCGGAAGACG
AAGAACGGAGGCGGCGTAGAAGAGAACGGAATAAAATCGCGGCTACAAAGTGCAGAATGA
AGAAACGGGAGAGAACCGTCAACTTGGTCACGGAGAGCGAGGTCCTCGAAAACCAGAATA
TTGATCTCAAAGCACAACTGAAGGATTTGGAAGTTCAGAAGCGGCAGTTGATTGACATGC
TGTCGCTGCACGCCGCATCGTGTGTCAAGAACAATTCAACAACGAGGCAATCGCCTACAA
TGCAGTACAACATGATTCGTTCTTACGATTCTCCATCAACATTCCCCTCTTCGTTTGAAG
CACACTCGCCATACATCCGACCCGAGTCCGCGAACATACTCGCATCAAGTTACACTTGCG
CTACGCCGATAGGTGATTCTTCGGTGGACACGATTTCATCGCTGGACTCTATTTACCCGG
CGCAGCAGTTGATTGAACAAGAATACAACAGGCCCGACAGCGTCCTTAGCCTAACTCCAA
CCTCGGATCCCAATTTCGTGACCACAGACGGGTTCCTGCCCAAAGCCACGAACCTCCTCA
TTCCGATTGACGCAGAGCAGGAATACTACGATCCTGATGTGAATTATAACTTGGCGAGCA
ATCAACAGTGCCATACTTATCCCGGATCGGCTGCAGATGCACAGACTAAAATCAACAACG
GCCTGAACGATGGGTGTCTCGTTTAGTTTCGGACACATCCGTCGATCACAGTTCATTTTT
GTCGGGTCCAAAATTTCTTTCGACACGTATACGTATATTTTAAGCTTTGGATATAAAATT
CGAAATAGAGTATCACCGTTTAATTGTAATTCGCCTTGTCTTCTTTTATATACTAAAAAG
TGTCGCACGAAAAATCACATAATCTGGTAGTGACGTGAATTGATCGTAAAATTTATATTT
ACCATTCATCAGTGTGTCATGTGCCGTAAATAAGTCATAATAGACGTTCTATTACATAGT
TCATTAAAATTGTTGTCAATAAAACCGTTTTATCTCGTAAATAACAAAAACATAAAAGTT
AAATGGACGGAGAATTTATTTCGAAACGCATTCGTATGTCTACTGTGTAGAGCAACAATG
TAGAGTTAGTGTGATGCCTGTTATAACTGCGATTTTTTTGTCGTAAGAAATAAGATGTTT
TTGTGTAAAATTCAAGGTGCTTCTAATTTCAACACTAAAGCATTGAAATGAGATTTGTTT
ATTGTTAAAAAGCGTTGTGAGAAGTCACATTTACTGTCTTATAACATTCAGATGTGAACT
GTGAAACAGTTCTTTAGGTAGGTCCATTAAAATATATTATTTAGATGTTAAAACCTAACA
ATTACCATGTTTGTTTTAATTTCTTTCAAGTTCTATAATTTTGCTTTGATTCGTTTTAAA
ATGTTTGGTTTTTGAAAGATCTGATTATTTTTGTATGGTGCAATTTAGTGTACGAGTAGT
TGGTGTTTTTTTTTTATCACTACCGATTTATGGAATATTAAATTTACTGCCTTCTATTGA
AATCTTAGACGCATAACGTAGTTCTAGTCTAAGGAAAATAAAGAAAAAAGAAACGCCCAA
ATCAAGGAATACATTTATAAAAATAGCATCACATAAATATTGTATATACATAGTTTAAAT
GTTTAGTACAAAAACATTTTGAATACCTCCTGTTAAGATTCCAAATCGTAATAGTTTTGT
TACAGATTCATATTATTTTATATTTTATAATTCCAGAATATAAATTCGTTATTGCATGTA
AGATAGTTTATAGATTAAGGTGCTTTAACTCAGGATAAATCGTGATATAATATTTGTTTT
AAGCATTATAATGTTGATTACTAATTTATAGAGGCGGTATCCATTATTACTTTTAAGATT
CCATATTTTAATAAACTCGATTATGAATTATTGAAACAATTGTTATTCTTATACATCGTG
AATGTGAAAGAAAGAAAGGACTGAATTTAATGGCCTTCATACATATATGTACAGTTGATA
CTTATATAGTTTTTCGAGCTTGCGATGTGCAGTATCGAATTATCCCGCAAAACATTGTAA
AATTTATATTTTGTTATGAAAGATAATACGTTTACGTGTTACTTGTTTAACGATTTAACC
CAAAAGATAGCAATCTAATATAAAGTCGTAGACGTAATAATAAGGGTTTGTACGTTGTCT
TCCTCGGGCAGATAATAAAACGAACAAAAATGAGTAAGACGAAAAGTCAGTTAAAAAAAA
ATGAGAATTCAGGATTCGATCCCTGAAACGTGCCTTTGCAACCAGTGATCCTAGTCCATG
CGGCCTTACCATCGTAGCGTACGGTCAGTCGCGTTAGCATTTATTTTTGTACTGTTGGTC
TTGTTGTTGTGATAAAAATACATTATTTATTAACGCAGAGCACAATAACTTTGTTATTTC
TTGTACAACAAGATTGCAGAGTCTCCCATGTTTATGTAACATGAATCCATACATAATAAG
GACATTTGTTGACGCTTTTAAGACATAGTTCTACCGAAAATTTGGCGCTGATATATTATG
TTATCGGATTTAAATTTTGACTTGTATAAATCACCATGCCTGTAATTCAGACATATATTA
AGACATCAACCTAAGATAGCCTTTTTCTTTCAAAAATCGACACGATAACGATTAATAGGC
ATATAGTCTCATCACGTAGTATGAAGTGTCTTAAGATATTAGACATTTTTTTCGTAAATT
GTCATTGGATTATCGTGTCGGTATTATCGTTCTACACTTCTGTAGTTGTACTGTTTTGTC
GGTCTATGTTGCAAACTTGTAAGGGACTGATTTGTCTATGTCCATTGAAATTTCTAGAAG
TTATTAGCTTTTGTTGTTTGATTGTACCGT
(4110 bp)

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