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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c6484_g1_i1
Scaffold_idBomo_Chr16
NCBI non-redundant
(nr)		Small_nuclear_ribonucleoprotein_Sm_D3_[Danaus_plexippus_plexippus]
Ontology
GO:0000387 P spliceosomal snRNP assembly
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0005687 C U4 snRNP
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030529 C ribonucleoprotein complex
GO:0034709 C methylosome
GO:0034715 C pICln-Sm protein complex
GO:0034719 C SMN-Sm protein complex
GO:0071208 F histone pre-mRNA DCP binding
Transcript
Level		FPKM:116.53 TPM:89.38
ORF EntryO_BomoASG1045_complete:A_BomoASG_c6484_g1_i1
Sequence
(Nucleotide)
CTCGCCGCCATATTACATTAGATGTCTATGGATTTGAAGCGTCTAATTTTTTTGAAATAT
TCTTTCCCATTTTTATCGTAAATAATCTAAGAAATAATACTGAATTATTGTCCTTTATCG
TACGTTTTTCTTAACTAAAACGTAAACATGTCTATCGGTGTGCCTATTAAAGTACTTCAC
GAGGCGGAAGGTCATGTAGTGACTTGTGAAACAAATACCGGTGAAGTTTATAGAGGGAAA
TTAATTGAAGCTGAGGATAATATGAATTGCCAAATGACTCTCGTAACAGTCACATACAGA
GATGGCCGAGTTGCACAGCTCGAGAATGTGTACATCCGTGGTTCCAAGATCAGATTTTTA
ATATTACCGGACATGTTGAAGAACGCGCCAATGTTCAAAAGACAAGGGAATAAACCTACT
GCAGGACGAGGGAAGAGTGCGATACTGCGAGCCCAAGCTGCTGGTCGAGGACGAGCAGGT
GGAAGAGGTGGGGGCCACCGTGGAGGCTGGCAAGGTGGGTCAGGACCATCTCGACGCTAG
CGTTAAGATATTTTTTAGATAGCTTAAGTTGTACTTGTCTTATATTTCAATTGTCAAGGA
ATTATTTCATTATCATTCTTATATATTGATATATCTAAGTGAGAAAAATACAAATTTTGG
AAATAGAACAACTGTTTGTTCAAAGATTATTATTATGTTCTCAAATGTAACAATAAGGTC
CTGTTCCAGATTTTCTGTTTTTTTATTTTGGTCACCCTTCAATCTGCTTTACACATCTTA
GGTCTCATGGACCATTTGATCAAATAGACACTACACACTGATGCTACCCTATGGTGACTT
ATTGTGACTCCCAATCAATACAATGTTTAATCTCTATGTTCTATCCTTATATCAGTCCCA
ATAATCTAGAAATCTTGTCCATATGATGGGTAATAGTTCAATCTTGTTTTGGCTTGAGGA
AATATCTATGTGTGGTTTATGCGGGGGTGACTATTGTAATTAAATATAAAAAGTTATTAT
AAACTGCCTTGTACAAACCAAACTTAACCAATGGCCGAGTTTTGACAATGTTTTATCCAT
ATAATTTTGAATTTTTTTGCACTGTAACTGGAGCCTATAGACTTTATGAAGGCCTGCACC
TACCATGAGGTTTGAGATCAAAGTCCCAGTTGTACTGTTTGGGATAAATGCTGTCTTAAT
GGGCAAATTGGAATGCTTCGCAGCATAAAACCTGCAACAATCATGCATGTTTGTTAAATG
TGTGTAACTCGGCATCTTATCCTTTAGGACACGACAACCTCTTATGCAAAATATTTTTAA
TTTGAATGTTTTATGTTCGAATTTAGATTAGTTACAAACAGTGTAACAAGTTTACTGAGA
CTGTCAGCAGATATGTGATAGGATGTGTCGTTGTGGGTGTGAATATCAAAAGATTGAAAA
CAAATAAAAAACAATTTGGATAATAAAAAAAAAAAAA
(1477 bp)

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