SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c6442_g1_i1
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		poly(U)-specific_endoribonuclease_homolog_[Bombyx_mori]
Ontology
GO:0003723 F RNA binding
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0004521 F endoribonuclease activity
GO:0005575 C cellular_component
GO:0005576 C extracellular region
GO:0016787 F hydrolase activity
GO:0016788 F hydrolase activity, acting on ester bonds
GO:0046872 F metal ion binding
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
Transcript
Level		FPKM:24.39 TPM:18.71
ORF EntryO_BomoASG1028_complete:A_BomoASG_c6442_g1_i1
Sequence
(Nucleotide)
CGTCACCCAAAGGTCGAACATCGCCCACTCCGCGCGGGCTCTATACTAAAATCACTAGTG
CGCCGGGACTGCGCTAGATCATACGCATTAATCAAATATGAAAATTACATTGATTTTCGT
TGTTTTTCTGGGGGTATGTCACGCTGATGACATAGCCCAGGCTGCGGGCCAGATCTTCAA
CAACATCCTTCCCAACTTGATTAGCAATCATGTGACTGGTCAGCAAGGGAACACAGCTCA
AAACACTTTCCAGCAAATAGGCACAGTTGTCGGTGGCGTCGTTGACTATGCGAAGAAGAA
GAGCTACGAAGATTTGTTGCGCCAAGCACAAGATTCGACGACCGACGATGACCTCCTCAG
AGTTAGCGAGGAAATGTTTAATGCAGATATAAATAATGCCTTCAACTACATTCAAGTGAA
TTTACAAGGCAAGACCACTCCTATGTCTAGGAATGATGAAGCACAATCGAATTTATTAAA
CGTTCCTGAGAATGTATGGAGCGGACCAACAATAAGACCTTTTGTTGCACTATTCGACAA
CTATCACAAGAATGTGATCAGACCAGAGTTTGTTACGCCGAATGAAGAAACGGAACAAAC
CACTTACATCAACACTATTCTTGCTACGGGACCCATCAGGAGCCTCATTACTTTCTTAGT
CAACAAAGGCATTACTCAGCTGAATGAGTATCCCGAACAAGTTGAGCTGCTGAGAAAGAT
TTGGTTCACGAAGTACGCACGCCACTGGACCGGCCTTTGCAAATGCAGTTGCGCCTTCGA
GAACGTGTTTATGGCTGAACTCAAATCTAATGAGGTTCTAGGTCTTCACAGCTGGTTGTT
CTTCGCTAAACGTGAATTAGATCACAAAGCCAACTACTTGGGTTACATCGACAAGCTGGA
TCTTAGTGGCAAAGGACTGATCCTCAAGCAGCACTCGGTGTTGAGCGAAACGAAAGACGC
GCCCGAAGTGAACATGTTTGTTGGCACCTCCCCCGAACTGGAGACCGCTCTGTACACGCT
CTGTTTCATGACCCGCCCGGACAGACCTTGCAGACTGCGCTTCAACAACATACCCTTCAC
TATCCAAACAAAATCGATCAAAGTCGAAAACTTACCGGTCATTGACACCGCTTACCCAAC
TTGGTAAAAAAATAATATTTAAAAAGACAAACAAGTCTTCTCTTAAAGGAAGAACTATAG
TTTTATTATTATATTTTCTACAACATACATTTGTGTATCTAACAAATAGTCAATTTTATT
AATGCAACATATATTTCGAAACCTCGAGATTATCATAACGATGTTCTAAATATGTAAATA
AATCGAACAATTTATACATATTTTTTAAATAATAAAACACCCAATCGAAATCTCTAAAAA
AAAAAA
(1386 bp)

- SilkBase 1999-2023 -