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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c30599_g5_i5
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		nucleotide_excision_repair_protein_[Bombyx_mori]
Ontology
GO:0000111 C nucleotide-excision repair factor 2 complex
GO:0003677 F DNA binding
GO:0003684 F damaged DNA binding
GO:0003697 F single-stranded DNA binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006289 P nucleotide-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0010777 P meiotic mismatch repair involved in reciprocal meiotic recombination
GO:0071942 C XPC complex
Transcript
Level		FPKM:2.70 TPM:2.07
ORF EntryO_BomoASG19532_5prime_partial:A_BomoASG_c30599_g5_i5
Sequence
(Nucleotide)
AAATACGTGCCTCACTATAATACGGTGACGCGAAAATTACGAGCCGAACTGGATTGGTGG
GAAAAAGCTCTAAGCCCGTGGGTTGGACCTAAGACTGCACGGGACAAAGAAGAAGATGAA
TATATAAATAAGATGCAACTTGAAGCACCTTTGCCGAAAAGTATTGCCGAGTACAAGAAT
CATCCTCTGTATGCTCTAAAAAGACACTTATTGAAGTTCGAAGCTATGTATCCATCAGAC
GCGGCAACATTAGGATTCGTACGCGGCGAAGCGGTATACTCCAGGGACTGCGTGTACGTA
TGTAGATCACGAGATCTGTGGCTTAAAGAGGCCAAAGTTGTCAAACTTGGTGAAAAACCT
TACAAAATTGTGAAAGCGCGGCCGAAATGGGATAAGTTATCAAATACATTAATCAGAGAT
AAAGTTCTGGAATTGTATGGACCATGGCAGGTTCAAGACTATGAACCACCTGTAGCTGAA
AATGGAATAGTGCCTCGGAATGCTTATGGAAATGTAGAACTGTTCAAGGAATGCATGTTA
CCTAAAGGAACAGTGCGAATTAAATTACCTGGTTTAAATAGAGTGGCAAGAAAATTGAAC
ATAGACTGTGCACCAGCGATGACCGGCTTCGACTACGACGGTGGCTGGTGTCATCCTGTT
TACGACGGCTTTGTTGTTTGTAAAGAGTTTGAGGGAGTGCTCACAGAAGCCTGGGTCCAG
GAACAAGAAGAACAGGAAAAACGTGAACGCGAAAAAACCGAAGCCAGAGTCTATGGAAAT
TGGAAGAAGTTAATCAGAGGTTTGCTCATACGAGAAAGGGTCAAAGATAAATATGGTTTC
GAAAAACTCAGTGCGTCCCAACCAACAAAAGGTAAAGGAAAAGCACCTCGATTTGTTGTA
AAGAAAAAATAGCTTTTAATTTTTTTGACGTGACAACGTCTTATAATTCGATGGAGCCGG
CTGCACGCACGAAAAAACATGACTCGTGCGGCGTTACCTCGCTCCGAGGTGTTCCGCGAT
CACGTGGCTAAACTAAAAAAAAAGTTTTTTCTTATGACGCTGTCACGTTCAACTATTGTC
AGTAAACCGACTTTACAGACAATAGTTTACATATAAACGCGGTCCTAGGAATGGCTTTTT
GTTTGTGTCATCGAAAGAGACAAAACAAGGCTAACTTAAGGTCGGTGTATACGTAACGAG
ATGTGAATGGGACGGGTACTCGGATCTAACGTGCTAGTGTTGTGAACAAGGATAGATAGA
ATTGGCTTTAATTGCTACTGCTCTAGATGAGGAAGTAGCTCCTATCTTACGTGGTAGAAT
AGAGAACAATAAGGAGAATACCACATTATAAAGAACTTTTGAATGATGAGACTCAATTTT
ATCAGTTTTTTTGCCAAATGCCAAAATAATGTTTTGCTTTACTGGAAAATATCATCGTCA
AGACGTCACTAATTCTATCTCCGGAACGAATAGAGTGACTGTGCATACGAAATATCCTCT
TTCATATTAATTTAGTATGAACCCATCCCGTCCGTATAGAACTTGTGACGTATGCAGCGA
TCTTTAACCTAGAAGATTTTATTACGTGTCAACAACAAAGGCGCGCTAACACGAAAAAAA
CGCGCGGGAACTTTCTATAAGACTGATAGTTCGTTGTATTTTTTTTTTCGACCTCGTCCG
CCGACCGAACCAAATAGGATATAATATAGATATATTTATATACACAATACATACACACAC
ACATTCCCCCCGGTTTTACCCGTGTCCTCCATAGACTACAATAGCGCGGCCCGCCAATAC
AGATTGTTGTGTTCGAAAACGGAGAACTTTCGCGGTGAACTCATCGGAACTATCGGCTGT
AGCAACGTTAACGTAAGACTAAAATTTCTTGATAACTCTGTTGAATACTGGCTAAAATTC
GAAAATAAACATCACATAAGCAAAGTAAAAAAAAAAAAAACAATATGGCCGCCGATTCAC
AAAAGTGACATTTGTAATGTCACTTGAAATTTTTAGTTCCGTCTGTGGTTTGTCACGTTT
TTTTTTTTTTCGTCTTTCGAGAACACAGCAGTCTGCGTTGTTGGTGCCTTCAATAGTTTA
CCGATATATACAATTGTTATTTTTTTACAATAATATATAAGCACGTACGCGGTCGGCGGA
CGGGCGATTGACGAAGGTTGCAGCGAAAACGATTCAAATCGGCTTGTCACGACATCCGCA
TTGATACGAATGAATCCAGCACAATATATGTTTTGTACGAATTTTTTACAGTCGAAAGCT
CAAAATTACGAGCTTTACTTTAATAATACAAATAAATCTTGAAATTTTTTCTAATGAGCA
ATAACTTCATGAGGGTATTTGAATAAAAGCTTTCTTATATCCATCTGTGATTGTGGTTTG
GAAATGCGTAATAATTTTTCACGCCTATAAATGTATTATCTTGAGGCTGTATGTGCAAAA
AAACTGCACCTAAAAAAAAAGTTGATTGACATTGACTTGTTTATCAAATTTGAAAATTTT
AAACCTATTTTTTCAATCGAGTTTTCTTCATGGCTAGTTTTTTTGTACAATCAAAAACTA
TCGTTAAGTACATAGTTGATTTGGCAGTTAATGTCGAGAATATTTTTTATTTTTACTGTC
ATTATGTTTAAAAAAGAACCTTAGCTTTTTGGTTGGTTTGAAAATTGTAAAAACCAATTT
CAGCAAAAGTCAAACAAAACAAAAAGAACAATGTAATCTTTGAAATGTTTGGTAAAAACG
ATTCATTCCCACGTGTAAATACCACGTTTTATTGTACGAAATTAGGGTTTGTTTTTTAAG
AATAAAATTAATTTTAAACTCTAAATTGATGTAATTTTTTGATTGATGTAAAAACTGTTT
CC
(2882 bp)

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