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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c30556_g2_i7
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		putative_pre-mRNA-splicing_factor_ATP-dependent_RNA_helicase_PRP1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003725 F double-stranded RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0005689 C U12-type spliceosomal complex
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006397 P mRNA processing
GO:0008026 F helicase activity
GO:0008380 P RNA splicing
GO:0009636 P response to toxic substance
GO:0016787 F hydrolase activity
GO:0043279 P response to alkaloid
GO:0044822 F RNA binding
GO:0071008 C U2-type post-mRNA release spliceosomal complex
Transcript
Level		FPKM:48.16 TPM:36.94
ORF EntryO_BomoASG19419_complete:A_BomoASG_c30556_g2_i7
Sequence
(Nucleotide)
CACTACGTTAGCCATTTTGTTGGCTTTGTTAAAATACTGAAAAAATCAGTAGAGCCCAAC
TATTAATTGAAATACGTGTTTTATGATTTATTAAAATGTCCAAACGTCGTATTGAAGTAA
TTGATCCGTTTATCAAAAAGAAAAGGGAAGAGAAGGCTGCGGCTGCTGCGAAATCTGGAA
TCACCGGTGAACCTTCAGAAGCAACTACCAACACGACTACCACCATGGCTACCAATACAC
CTGGACTAAATAAATATACCGGTCTTCCGCATTCACAGCGTTACCATGAGCTATTACGAA
AACGTTTAGGACTCCCTGTCTGGGAATACAAAAATGATTTCATGAGATTACTCAACACTC
ATCAATGTATAGTGCTCGTAGGAGAAACAGGGTCAGGGAAGACTACCCAGATCCCCCAGT
GGTCTGTAGAATTTGCTGCAGTAAGTGGCCTAGGCAAGGCTAAAGGAGTGGCCTGTACTC
AACCAAGACGAGTGGCTGCTATGTCTGTTGCTCAGAGGGTAGCCGAAGAAATGGATGTGG
CTTTGGGTCAGGAAGTTGGTTACAGCATTCGTTTTGAAGACTGTTCAGGGCCACAAACAC
TTCTAAAATACATGACAGACGGTATGTTGCTAAGAGAGGCTATGTCTGACCCAATGCTAG
AACAATATAGAGTTATACTCCTCGATGAAGCCCACGAAAGGACACTTGCAACAGATATCC
TGATGGGTGTTCTCAAAGAAGTCATAAAACAGAGGTCCGATTTGAAACTCGTTATTATGT
CAGCCACATTAGATGCTGGAAAGTTCCAGCATTATTTTGACAATGCTCCATTAATGAACA
TTCCTGGTCGGACTCATCCGGTAGAAATATTTTACACTCCACAACCTGAACGAGATTACC
TAGAAGCTGCGATAAGGACTGTAATACAAATCCATATGTGTGAAGAGATCTCTGGTGATA
TACTACTATTTTTAACTGGACAAGAGGAGATTGAGGATGCTTGTAAGAGAATTAAAAGAG
AAATAGACAATCTGGGAACTGATGCAGGAGAGCTAAAGTGCATACCGTTATATTCAACAT
TGCCGCCAAATTTACAGCAACGGATCTTTGAGCCGGCACCTCCAAATCGACCAAACGGAG
CCATCGGCAGGAAGGTGGTAGTGTCCACAAACATCGCTGAAACATCTCTGACTATTGATG
GTGTTGTTTTTGTCATTGACCCAGGTTTTGCGAAACAAAAAGTTTATAATCCCCGTATAA
GGGTGGAATCGTTATTGGTTTCTCCGATAAGTAAAGCATCAGCCCAACAGAGAGCGGGGA
GGGCCGGCAGAACTAGACCTGGGAAGTGCTTCCGGTTATATACTGAGAAAGCATACAAGG
ATGAAATGCAGGACAATACTTATCCTGAGATTTTGAGATCAAACTTAGGATCTGTAGTTT
TGCAGTTGAAGAAGTTGGGCATCGATGACCTGGTGCATTTCGATTTCATGGATCCACCGG
CTCCGGAGACACTCATGCGGGCGCTCGAGCTGCTCAACTATCTGGCTGCGCTGGATGATG
ACGGTAACCTCACTGACCTGGGTGCTGTGATGGCGGAGTTCCCCCTCGACCCACAGCTGG
CCAAGATGCTGATAGCCAGCTGCAATCACAACTGTTCCAACGAGATCCTCTCCATCACTG
CCATGCTGTCAGTGCCGCAGTGCTTCGTGAGACCAAACGAGGCGCGGAAGGCTGCCGACG
AGGCTAAAATGCGTTTTGCCCACATCGACGGTGACCATCTTACGCTACTGAACGTATACC
ACGCCTTCAAACAGAACATGGAGGATCCCCACTGGTGCTATGATAACTTCATTAATTACA
GATCGCTAAAGTCGGGCGACAACGTCAGACAGCAACTTAGCAGGATTATGGACAGATTTA
ATTTGAAAAGAACAAGCACAGAATTCACAAGCAAAGATTATTACATCAACATACGGAAGG
CACTTGTAAATGGATTTTTCATGCAGGTGGCGCACCTCGAGAGGACGGGCAGCTACCTGA
CGGTGAAGGACAACCAGGTGGTACAGCTGCACCCTTCCACGTGCCTGGACCACAAGCCCG
ACTGGGTCATATACAACGAGTTCGTGCTCACCACCAAGAACTACATTAGGACTGTCACTG
ATATCAAGCCGGAATGGCTGCTGAAGATCGCTCCCCAGTACTACGAGCTGGGCAACTTCC
CGCAGTGCGAGGCGCGGAGACAGCTGGAGCTGCTGCAGGCCAGACTCGACTCCAAGCACT
ACCAGGAGGGCTTCTAGAATAAAGTACACATCATAGTATCCGTTGAGTGTGTTTTTATTT
CGTAACTATAGTAGAATTATTTTGTCGGTGCAGTTTGGGTCATAAAACATAGCCCGGCTA
GGGCGGTGAGCATGTTGCGCGGGCGCAACGCCATTATCGATAAAAACAAATGTGTCATCG
AAGGCAGGCACACGGCGGCGGGGTGGTATACGAAGGGTGGTGAGACATTGTTATGTTATG
AGTCATTTGTACTTACCTGCAAATTATAGTACATCATGTCGAAGAGAAATGTGCTTTTAT
GCATTCGTTCTCTGAATTTCTTTAGTGACACAGTGGCTACTCCTTTGTTTTGTATCAAAA
CGGCAGAATTTATTCAAAATAATATTTGCACATCAACACACACACAACACATGTATTAAA
TTTTTTCACTGAAATAAGAATAGTTTCCGAAAAGTTACAAAGTGTTAATTTCTGCCGTTA
TCGCTAACTTGCTGCGGCAATATGTGGTGTTAGTGATTTTTTCATTGATTTTTATCACTA
ACCCACAAAATGACAAAATTAAATACACTATCGACAACAATAATGCGCATCACTATGCCC
GTCCATAAGGCACGTGAGTGGAAGAGAGAGCGAAAT
(2916 bp)

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