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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c30555_g1_i6
Scaffold_idBomo_Chr28
NCBI non-redundant
(nr)		RNA-binding_protein_5_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000245 P spliceosomal complex assembly
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0006915 P apoptotic process
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0042981 P regulation of apoptotic process
GO:0043065 P positive regulation of apoptotic process
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
Transcript
Level		FPKM:19.58 TPM:15.02
ORF EntryO_BomoASG19415_complete:A_BomoASG_c30555_g1_i6
Sequence
(Nucleotide)
CGTCAGTCTTTTGTAATGATTTATGAAAGGAAATAATCTAATTACGATCACAGAATTTTC
AAGTGTAGTGCACTTTATTAAAGTAAATAATTTAACATCCGGCCTAAAGTGTTAAGATAC
TAGGGAAGTTACTCGTAATTACGTTACAGCAGGTAAACGCTACGATGTCTTGGCGAAGTC
GAGAGGAGCGCTGCTCGAGGTGGGACACCAACAAATGGGAACTCCGCGATCGGTCGCCTG
TATGGGAGCCTAGGAACGTCAGCCCTGAGTGCAGGTCGCCATCCCGACACCGACACTCGC
ATGATAGACGGCCTCGTCACGAGCGCGACTTTCGGCGTGACCGCCACGACCGGGATCGCG
ACCGTGACCGAGAACGCGACAGAAAACGGTACGAGGAAGCGCCCGCGCCCCCCTCGCCGC
CCGTCATCAGCGATGACAAAAAGAGCTCACGGTCTAGTAGTCGATCCGATAGTCGTGAGA
GGGACAGGTCTGATATGGAAATAGAAAAGGACAAGCACCAGGATGAGGTGCAGAACAACG
CATCACCGGGTGATTGGATCTGCAAGTGTGGTCTATACAACTTTAAAAGACGTCAGGTCT
GTTACCGTAGAACTTGTAATGGGAAAAGATCGGAGGGTGTAGTTTATGGAGGTGATGGGG
ATCGTAACGGTGTAGTCGAAACACCTGGCATCACAAAGAGGTTACTCTTTAGGAGGCTAG
ATGCTTTGACTACTGAAGAAAATATATTGGAAGAGCTTAAACTACGTTGCAGTAAAGAAG
TTCTAGAGTTAATTGTAGGTATTTCAATTGGTAGAGAAACTTTAACAGGTGCATCAAAGT
GTCTCGCCTACATCAATTTCAACTCCATAGCAGATTCTACAACAGCACATACAGAGTTGG
TGAATCTCCAACCACCATTAAGGATTGACGGTCGAGAAGTGCTTATAAGCTTTTACAATG
AACCTAAAAAAATTGTTAAACCAACACAAGTTGACTATACGTCATACTACTCTCAAATGT
CTTCGTACAGTGGTGCAACAACTCAAGCAATGTCTGAGGCTGATCGAGTCAATGCAGCTG
CTGCAGTAGCTCAGTCTGCTATATCGGCAGCCCAGGCTAGACAGCTATCATGGACGCCAG
TTGGTGCTGTACCTTTCACTGGTACTACCCAAACTACAAAAACAAATGTACCCATAGGTG
ATGGGAAGACAGTTTATCCTGCCCCAGATGTGAGAACATTCATGTATGATGAGTCATCTG
GTTACTATTATGACCCGTCAACTTGTTTATACTATGATGGGAAGACACAATATTTTTATA
ATAGTCAAATCAGTCAATATATGTATTGGGATGGTAAAACAAACACTTATATTGCTGCAA
CACAGGCTCAGAATGCTGAACAAAACAAACAAAGAGAGGCCAAGGAGCCTGATGAAAAGA
AAAGGAGAGACAAAGAAGACAAAGTTAAAGTAGCTAAAAAGATAGCTAAGGATATGGAAA
GATGGGCACGGACTCTAAATCAAAAGAAAGAGAATGCTCGGAGTAACTTTGTTATGGAAC
AGCCAACTGACACAAGTGCTAGCAAAGGCTCAGCAGACATTGGTTTTTCAGTACTAGGAG
CTGGACCATCATTAACTCATGTAAGAGAAATATCCCCACCTCCCAACACAGATGAATTCT
TGGTCAAAAAGATCTCAGAACCAGTATTTGATAATGATGATGACATTATTGACTGGGACA
AATTAACCTGCTTGTTATGCAAAAGGAAATTCCCTTCTGTAGAAGTGTTGAATAAGCATA
AAGTTATGTCAGACTTGCACAAACAAAATCTAGTTGAATTTAGGAAGAAGAATGACTTGA
TTCCACAGATGAATGGTTATAGAGACAGGGCAGCTGAGCGACGTATGAAATTTGGTGAAG
ATGAGCCTCCAATGATAAGAAAACGTTATGAGCCTTCTGAACCAATAGGTCCACCCATTA
ACCCGCACCCACCTCCAAATGTAGTAGATACAATAGGAGGTAAAATGCTGCAAAAAATGG
GCTGGTCGGAAGGTCGAGGTTTAGGTAAGACTGAGCAGGGACGAATAGCTCCCATAGAAG
CAGAACAGAGGCCAAGTTTAGCTGGTCTGGGGCAGAAAAGAGGTATATACACTCCCACAC
CTGGTGAAACATATCGCGATACAGTTAAGAAACTTATGATAGCAAGATATAAAGAAGTTG
TTGGACAAGAAGAAGGGAAATAGATTCGACCTGGAATTCTACAACGCTCCCGTCACACGC
GTATTCGACAATCGAGTCTACGCGCGAAGCTGGAACCACGTGCCAAACAAAATATTAAAA
AGTACTTCATTTTATACTCGTTGGATCGGAAATGAATTGATCAAACGCCATTTTAAAAAT
ATTTAGCTTTCTTCCGTAGCGTTTCGTGTATAGTTTAACTTTAATGTATATATATATAAA
ATAATTATGTAGTAAGGAATTTTGAGATTGCGTTTGATTGTAAATAAAGATAAATATAGG
TAGGTTATATTATAAAAACACGCTCTAATAATAAGCCCAAAAATTAAAGTAATATTTTAA
TTCTAGTGT
(2589 bp)

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