SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c30555_g1_i5
Scaffold_idBomo_Chr28
NCBI non-redundant
(nr)		RNA-binding_protein_5_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000245 P spliceosomal complex assembly
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005681 C spliceosomal complex
GO:0006397 P mRNA processing
GO:0006915 P apoptotic process
GO:0008270 F zinc ion binding
GO:0008380 P RNA splicing
GO:0042981 P regulation of apoptotic process
GO:0043065 P positive regulation of apoptotic process
GO:0044822 F RNA binding
GO:0046872 F metal ion binding
Transcript
Level		FPKM:1.82 TPM:1.40
ORF EntryO_BomoASG19414_complete:A_BomoASG_c30555_g1_i5
Sequence
(Nucleotide)
AATTACGTTACAGCAGGTAAACGTGAGTAAAAGCTACATTGAAAAAGAAAGCCACGCATT
GCGCAGCAACCATGGCGGAGACAGGAATCATCAGTGAGTATAAGTATCTGATCGTGCGGG
GTGTTCGCAGGCTACGATGTCTTGGCGAAGTCGAGAGGAGCGCTGCTCGAGGTGGGACAC
CAACAAATGGGAACTCCGCGATCGGTCGCCTGTATGGGAGCCTAGGAACGTCAGCCCTGA
GTGCAGGTCGCCATCCCGACACCGACACTCGCATGATAGACGGCCTCGTCACGAGCGCGA
CTTTCGGCGTGACCGCCACGACCGGGATCGCGACCGTGACCGAGAACGCGACAGAAAACG
GTACGAGGAAGCGCCCGCGCCCCCCTCGCCGCCCGTCATCAGCGATGACAAAAAGAGCTC
ACGGTCTAGTAGTCGATCCGATAGTCGTGAGAGGGACAGGTCTGATATGGAAATAGAAAA
GGACAAGCACCAGGATGAGGTGCAGAACAACGCATCACCGGGTGATTGGATCTGCAAGTG
TGGTCTATACAACTTTAAAAGACGTCAGGTCTGTTACCGTAGAACTTGTAATGGGAAAAG
ATCGGAGGGTGTAGTTTATGGAGGTGATGGGGATCGTAACGGTGTAGTCGAAACACCTGG
CATCACAAAGAGGTTACTCTTTAGGAGGCTAGATGCTTTGACTACTGAAGAAAATATATT
GGAAGAGCTTAAACTACGTTGCAGTAAAGAAGTTCTAGAGTTAATTGTAGGTATTTCAAT
TGGTAGAGAAACTTTAACAGGTGCATCAAAGTGTCTCGCCTACATCAATTTCAACTCCAT
AGCAGATTCTACAACAGCACATACAGAGTTGGTGAATCTCCAACCACCATTAAGGATTGA
CGGTCGAGAAGTGCTTATAAGCTTTTACAATGAACCTAAAAAAATTGTTAAACCAACACA
AGTTGACTATACGTCATACTACTCTCAAATGTCTTCGTACAGTGGTGCAACAACTCAAGC
AATGTCTGAGGCTGATCGAGTCAATGCAGCTGCTGCAGTAGCTCAGTCTGCTATATCGGC
AGCCCAGGCTAGACAGCTATCATGGACGCCAGTTGGTGCTGTACCTTTCACTGGTACTAC
CCAAACTACAAAAACAAATGTACCCATAGGTGATGGGAAGACAGTTTATCCTGCCCCAGA
TGTGAGAACATTCATGTATGATGAGTCATCTGGTTACTATTATGACCCGTCAACTTGTTT
ATACTATGATGGGAAGACACAATATTTTTATAATAGTCAAATCAGTCAATATATGTATTG
GGATGGTAAAACAAACACTTATATTGCTGCAACACAGGCTCAGAATGCTGAACAAAACAA
ACAAAGAGAGGCCAAGGAGCCTGATGAAAAGAAAAGGAGAGACAAAGAAGACAAAGTTAA
AGTAGCTAAAAAGATAGCTAAGGATATGGAAAGATGGGCACGGACTCTAAATCAAAAGAA
AGAGAATGCTCGGAGTAACTTTGTTATGGAACAGCCAACTGACACAAGTGCTAGCAAAGG
CTCAGCAGACATTGGTTTTTCAGTACTAGGAGCTGGACCATCATTAACTCATGTAAGAGA
AATATCCCCACCTCCCAACACAGATGAATTCTTGGTCAAAAAGATCTCAGAACCAGTATT
TGATAATGATGATGACATTATTGACTGGGACAAATTAACCTGCTTGTTATGCAAAAGGAA
ATTCCCTTCTGTAGAAGTGTTGAATAAGCATAAAGTTATGTCAGACTTGCACAAACAAAA
TCTAGTTGAATTTAGGAAGAAGAATGACTTGATTCCACAGATGAATGGTTATAGAGACAG
GGCAGCTGAGCGACGTATGAAATTTGGTGAAGATGAGCCTCCAATGATAAGAAAACGTTA
TGAGCCTTCTGAACCAATAGGTCCACCCATTAACCCGCACCCACCTCCAAATGTAGTAGA
TACAATAGGAGGTAAAATGCTGCAAAAAATGGGCTGGTCGGAAGGTCGAGGTTTAGGTAA
GACTGAGCAGGGACGAATAGCTCCCATAGAAGCAGAACAGAGGCCAAGTTTAGCTGGTCT
GGGGCAGAAAAGAGGTATATACACTCCCACACCTGGTGAAACATATCGCGATACAGTTAA
GAAACTTATGATAGCAAGATATAAAGAAGTTGTTGGACAAGAAGAAGGGAAATAGATTCG
ACCTGGAATTCTACAACGCTCCCGTCACACGCGTATTCGACAATCGAGTCTACGCGCGAA
GCTGGAACCACGTGCCAAACAAAATATTAAAAAGTACTTCATTTTATACTCGTTGGATCG
GAAATGAATTGATCAAACGCCATTTTAAAAATATTTAGCTTTCTTCCGTAGCGTTTCGTG
TATAGTTTAACTTTAATGTATATATATATAAAATAATTATGTAGTAAGGAATTTTGAGAT
TGCGTTTGATTGTAAATAAAGATAAATATAGGTAGGTTATATTATAAAAACACGCTCTAA
TAATAAGCCCAAAAATTAAAGTAATATTTTAATTCTAGTGT
(2561 bp)

- SilkBase 1999-2023 -