SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c30457_g2_i1
Scaffold_idBomo_Chr14
NCBI non-redundant
(nr)		protein_kinase_C_and_casein_kinase_substrate_in_neurons_protein_1_isoform_X1_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005768 C endosome
GO:0005769 C early endosome
GO:0005802 C trans-Golgi network
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0005886 C plasma membrane
GO:0005901 C caveola
GO:0005911 C cell-cell junction
GO:0005925 C focal adhesion
GO:0006897 P endocytosis
GO:0007165 P signal transduction
GO:0008092 F cytoskeletal protein binding
GO:0008289 F lipid binding
GO:0016020 C membrane
GO:0019898 C extrinsic component of membrane
GO:0030036 P actin cytoskeleton organization
GO:0030659 C cytoplasmic vesicle membrane
GO:0031410 C cytoplasmic vesicle
GO:0032587 C ruffle membrane
GO:0036010 P protein localization to endosome
GO:0042802 F identical protein binding
GO:0042995 C cell projection
GO:0043231 C intracellular membrane-bounded organelle
GO:0045806 P negative regulation of endocytosis
GO:0048858 P cell projection morphogenesis
GO:0055038 C recycling endosome membrane
GO:0070062 C extracellular exosome
GO:0070300 F phosphatidic acid binding
GO:0070836 P caveola assembly
GO:0072584 P caveolin-mediated endocytosis
GO:0097320 P plasma membrane tubulation
Transcript
Level		FPKM:21.08 TPM:16.17
ORF EntryO_BomoASG19152_complete:A_BomoASG_c30457_g2_i1
Sequence
(Nucleotide)
CGATGTTTCAAGTTGTGCGGAGTGAATAAAGCTTTGCCAAATTTGTGTTAATTCACAAAT
TTAGTTAAATTCGTTACCTTTGAAGTGTTGAATAATTATCATTGAAACATTATATTCAAA
TTTGTGAATTTATTGGTGACTAAATTGTAAGTGTTGTTCGATGTAGAATGTTTGTTGTGT
CGCTGTAATAGGATCGGTGTAAAATAAAATATTGGATTACTGATCAGGGTTTAATTGATC
GTTCTGAATTATCGATCGTGAGAAACTGGAAAGTGCGTCAATGAGACGTTGATTCTCGAA
CGAGTAAAGGCATCGCCACACTGTTCGGTTCGCTTAGTTAGGGGCGGTGTGTGAGTGTCG
CACCGCCATGTCGCACCACAGCGACGAGCATGCGTTGCTCACAACCACTTCCGACTCGTT
CTGGGAGCCTGGTAACTACAAGAGGACCACCAAGAGAGTAGACGATGGACATCGACTGTG
CAGCGAACTTCAAACCCTGGTCCAAGAGCGTGCCGATATCGAGAAAGCGTACGCGAAAAG
CCTCAGAGGATGGGCTAAGAAATGGAATGATTTGATCGAAAAGGGACCAGAATACGGCAC
AATGGAAGCTGCTTGGAAGGGTAGCATGGTGGAAGCGGAACGACTTTCAGACCTCCACCT
CAGCGTCAGGGATAGGCTGGTGAACGACGTTATGGCACAGATAAAGAACTGGCAGAAGGA
AACTTATCATAAGTCAATGATTCAACTAAAAGAACGCAAGGAAATGGATGAAGCATTCAA
GAAGGCCCAGAAACCATGGTCGAAATTACTTCAGAAGGTTGAACGCGCCAGGCTAGAGTA
CCACACGGCTTGCAAACAAGAAAGAACAGCGCAGAATCAGGAAAGAAACGCCAGCGGAGA
CAGCTCTTTTAGTCCAGATCAAGTCAAGAAAATGGCAGATCGTGTATCGAAATGTCGCGA
CGAAGTGTCAAAGAACCGAGAAAAATACCAGACAGCTCTAGCCGAGATCACGGCGTACAA
CCCTCGATACATAGAGGACATGACTTCAGTATTCGATAGGTGCCAACAGATGGAAGCGCA
GCGATTGAAATTCTTCAAAGATGTGCTGTTTAGCTTCCACAAATGCCTCAACATAAGTCA
AGAACCGAGCTTACCGCAAATCTACGAAGAGTTCCACCACACGATCAACAACGCAGACAG
CCAGAAGGACCTCAAGTGGTGGGCCAACAACCACGGGGTCAATATGGCGATGGCCTGGCC
GCAGTTCGAGGAGTACACCGAGGAGTTCCGGGACATCGCCAAGGGCAAGTCCAAGGAGAG
CCTGCCCACCGGACCGATTACGTTGCTCAATCAGCGGCCAGTCAGCGAGGATGAGTTACC
GCCAATAACGAATAACAAGACGAACAAAAGTAACAATCACTCGGAGCCCCCCGCGCCCGC
GCCCGCTGCCCCACCCCTCTCCAACAACACCACCGCCAACAACACCATAGACAAGAAGAC
TATCAGCGCCCCCATCGCCGTCACTAACGGCACGGCGGGCGGCCCGAAGTCGAACAAGTC
GTCGCCCGCGCGGGAGGGCGCCGACAACCCGTTCGAGGAGGAGGAGTGGGACGGGGACGG
GGAGGGGGGCGCGCTCACGGACTCCGGCGAGCCCGGCCTGCCCGTGCGCGCGCTCTACGA
CTACACCGGCGCAGAGAGCGACGAGCTCTCCTTCCGGCAGGGAGACCTGTTTGAGAAGTT
GGAGGATGAAGACGAGCAGGGCTGGTGCAAGGGACGCAAGGACGGGCGCGTGGGGCTCTA
CCCGGCCAACTACGTGGAGCCCGTGGGCCACTAGCGCCGCCGCCCGCACGAGTCCCAGCA
CGACTGAATATATTATCTAAATATTATAAATATATCAGAATTTTCATCAACATCGTAAAC
TGAATTACTTGTAGATTTTTTTTAAGAGAAAATCTTCAATTGGAATCGTTTACATTAAAT
TTTATTTATATTTATCGAGAACAGCGCGTCGTATTGTCTATTATTATTCATAGCAACATT
TGGATTCACGAATACATACATACACGAGTACATAATTAATTTATTAGCGAGTCGCGAATT
AGTCATTAAAGTACAGGAGGACATTTGTATGAGCAGTCTAGTACGAGCGACTCTACGCTT
CGTCGAATCATATATCATCCATTTGTGATATATTTGAAATGTAAATGTGCAGCGAAATAT
TTCTATAAAATTTACCAATCGATAAAAAATATATTGTTTCAATACAAGATATTCCTCGCT
ATTGTAGGATATTTATACAATTTTCAATAATTTTTAGTGACGTGCCGTATTCTTGTAGTG
TGTTATATCGATGTGGTTTGAGTAGATTCAAATCGATGATGCGTATAAAATGAAATATGT
GAAATAATTTTTTAAGGTAGCGAAGCGGGTTACTCGGCTTCGTTTTCGATTTATGAATAA
TTAATTGACTTAGAACGTATATTTTTGGATAAAAATTGTTAGCTACAATTTGCACGTAAA
CCAAAAAAAATGTTTATTTGTGTTAGTGACATTGTATTATTGTTTCTATGAACTTTGTTA
ACTGAATAACATTGTCGAACAAAGCTTGAGAATAACTAGTTGGACACCACTGCCTTTGTC
GGGCACATTCAATTTAGCTAAGCCAAAAATTGTAGGCCAATATATAAATATATCGTAATA
GGCAAACCAAACGTTTAGATGGCAATGGGATTATACATATATATATTTTGTGATATAAGC
TCCTGTCGGTGGGTGTCGTTGTCTGTAGGTGTGGTTGTGTACATACACGCTTTTAATGAT
GTAATACTTGTCGTGAATGTATAGAGTATTTATTTCCCATTGTATATAATGTGTAATTTA
TGTGAGAATTTAAATTTGGTTAATATCGATAGTGTTGATTGGAATATATCGTAGTTTTTT
TTTTTTAGTTAAAGCTTTTTATGGACGCAACGTTATAAAGATGCGTTGTTTTAACAAAGG
AAAATGTTTTAAAGCAATTTTTATTCGTGGCTCGATAGCTATCGATATAAATCAACTCTA
GTATTAATAATATTACGATAGGGCGCATAAAACATTAATGACTGATTATTGGCCTAGTGG
TTTTTGACGGCTCGATTTAAGCTTCCATTTTGGCTGCCGGTTCTCATTCTAAGGTGCTAC
TCCCACGTCTCCCGCACCAGCGCAGACATGTGCACTGTATCCCAACTAAATATGCCACTA
CCGCATTTTAGGCTACATTTGACGCAAATATGAAATTGCCAAATAGAGCATTTACGAAAA
GAAGTTTTGCACGACGCAAGCGCCCTCTCGTCATTAGTTTTAAAAAATATCATTAATATA
TTACGAAGATGTTTACCTTTATTTTTCTTTTTCCTTTTGTACCTCGTTATATTGTTGTAA
TGTGATTATGACGGGGAGTCATACATAGTCACGAGGCTGAATCCGAACACCTCCTAGACT
ACTTGTATCGCGTTAGTAGCGACTTGTTTATATTAAATAACATTGTTATAGGTTCAGCAA
CCTTTTGTGAAAATTATTTGTATTATATTATTATTATCAGAGAGGTGGTTCTGGACCACT
TATGTTAATATATTAATAATATTGGTAATTAAATTGTTACATATGTGAAAAAAAAAAAA
(3659 bp)

- SilkBase 1999-2023 -