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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c30450_g1_i1
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		E3_ubiquitin-protein_ligase_UBR4_[Bombyx_mori]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005516 F calmodulin binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005813 C centrosome
GO:0005856 C cytoskeleton
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016032 P viral process
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
Transcript
Level		FPKM:4.55 TPM:3.49
ORF EntryO_BomoASG19117_complete:A_BomoASG_c30450_g1_i1
Sequence
(Nucleotide)
GACGTGGCCAATGACAATGCCACGCTACTTTCTGCTCTCTGCAAACATGTCGTACTGCAT
TGCAACGAGAAGGTGAGTGAGCGGATGCTGACCGCGCTGATCAGCGTGTGCGGAGACAGC
GCGTGCTCACCGCTGCTGCTGCGCGAGATGTGTCGGCTGGCGGACGCGCACGCCGGCTCC
GACCACAGACTGCTCTTCCCGGCGGCCGTGGGCTGGCTCGCCACCTGCGTCGACAACCTG
AGCAGTCCGGAAATACTGGAGAAGTTAGAGGAAGGACAAGTGGACGGTACTCTCGCACCG
CAGATCGAATCAGCTTGCGTTCTGTTGTCTTACTTAACTGACGCCTTGCACTCTATCAAC
ATTTCACCGCCGCAATCTTGGCGTTCAGTCAGTCCAACATGGGAGTCACCTGCTGATCTT
GGCTTTGATCTTGATTATACTGACGAGCAACAAGACGAAGACGACACTAGCGCCGACGAC
TCGGATGAAGATGCTATGCTCCAGTACAAGCTGTGCACGTTCACGGTGACTCAACGCGAG
TTCATGAACCAACACTGGTATCACTGTCACACGTGCAAGATGGTCGATGGCGTCGGCGTG
TGTACTGTGTGCGCAAGAGTCTGTCACAGAGGACACGATGTATCCTATGCGAAGTTCGGG
AACTTCTTCTGCGACTGTGGCGCCAAGCCCGACTCCAGCTGTCAAGCGTTGGTGAAGCGT
TCCGTGAGCGGCGCCGCGGGGACCAGAACAGGTGCAGAGGAAAGCACTCCGGCTCCGTCT
ATCCGGCGCCGGCCCTCGAGCCCGGTGGCGCCCGCGCTCATGACTCCGCCCAGACGACCC
GTGCACGCACACAACATACAAGGGTGTCGCGCGTTTCTGTCGTCGTACGGCGGATGGGGC
GCGTGCATGGAGCGCGTGCGCCGCCTGCTGGAGGCGCTGGGCGGGGCCGTGCGTGCGGCG
TGCCAGCGACACGCTCCCACGGGCGCACACGGCCGCGCCATGCGGGCACTCGCACATCTG
CATCTCGGCGACAAACGCTTCACGCACACAGACAACCTCATGCTGCCCACGTTAGGTTCA
CAAGAGGGCGCATTCGAGAACGTGCGCATGTCATACACTGGAGAAAACGGACAAACAATC
AGGCAACTGATGACTGCACATAAACTAAGACGTGTTGCCATGTGTTGCCTGGCGTCGCCT
CAAGGACGCAGGCAACATTTAGCTGTATCTCACGAGAAAGGCAAGATCACAGTTCTCCAG
CTATCAACTTTACTGAAACAAGCTGATTCGTCGAAACATAAACTTACGCTAACGCGCTTG
TCATCCGCGCCGATACCGTTCACGGTTCTAAGTCTCGGCGGGAACCCGTGGAATGAAGAT
TTGCTCGCAGTCTGCGGTCTCAAGGAATGTCATGTCCTGACCTTTAACAGTGCAGGTGCA
GTAGCAGATCACCTAGTTCTCAACACCGGTCTAGAGGGTAACAACTATGTAATTAAAGCA
ATATGGCTGCCTGGATCACAGACGCAACTTGCGCTGATAACTTCGGATTTTGTCAAGATT
TATGACCTCAGCAAGGATTTGAACAACCCTATGCATCATTTCCTCGTACCTAGTGGAAAC
GTACGAGATGTAACTTTCGTGAACCAAGACGGTGTTATGCACATGCTTTGCATGAGCTCT
GCCGGCCACATCTACTGGCAGCCCATGAGTGAAGAGTCCAGGGCGAGCCTCGGAACCTTC
TACGTTACCAACACTCTTGAAGTACTCCATCCTGAAATACAGGACGTGGCCGGACTGGTT
GGCGGTGGTGGAGTCTCCATATACTACTCGCATACATTGAAAATGTTATTCTTTTCGTAC
GCTCAAGGCAAAAGCTTCCTTGCTCCGTTGAACACTGTTGAGGAGAGCTTAAAAGGAACA
GCGATGATCACGTTGTCGGCGGCCGCAACGCAGAAGGAAGGGAGCGGTCGCGGCGGCGGC
AAGCAGGGGGGCGTGCAGTCGCTGTGTCAGTGGGCGGAGGTGCCCGGACATCCCGGCCTG
ATCACAGCTGTCATGCAAGCGTCGAACAACCCGGTCGTGCTTATGTTGACACCTACTAAC
ATTTTCGTGCAAGAAATAAAGGTCGTCCCGGCCAAAGCCAAGATAACGGACATGGTGGCG
GTGCGCCACTGGTGCGGCGGCGGAGGCGAACAGAAAAGCACGTTGATTCTGTTGTGTGAA
GACGGTAGCCTCCGCATGTATGCGGCCAACCCGGACAAGACTGGGTACTGGCTCGCCCCC
AGCGTGCAGCCCGCGCACGCGCCGCGCCGCCGCGCCCGCACCAACACGCACCACG
(2335 bp)

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