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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c30419_g1_i2
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		rab-related_protein_isoform_X3_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003924 F GTPase activity
GO:0005515 F protein binding
GO:0005525 F GTP binding
GO:0005622 C intracellular anatomical structure
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005769 C early endosome
GO:0005802 C trans-Golgi network
GO:0006886 P intracellular protein transport
GO:0006913 P nucleocytoplasmic transport
GO:0007165 P signal transduction
GO:0007264 P small GTPase mediated signal transduction
GO:0008152 P metabolic process
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0019882 P antigen processing and presentation
GO:0030670 C phagocytic vesicle membrane
GO:0030742 F GTP-dependent protein binding
GO:0031410 C cytoplasmic vesicle
GO:0031905 C early endosome lumen
GO:0035612 F AP-2 adaptor complex binding
GO:0035646 P endosome to melanosome transport
GO:0035650 F AP-1 adaptor complex binding
GO:0035651 F AP-3 adaptor complex binding
GO:0036461 F BLOC-2 complex binding
GO:0042470 C melanosome
GO:0045335 C phagocytic vesicle
GO:0090382 P phagosome maturation
GO:1903232 P melanosome assembly
Transcript
Level		FPKM:12.27 TPM:9.41
ORF EntryO_BomoASG19027_complete:A_BomoASG_c30419_g1_i2
Sequence
(Nucleotide)
GTTAGCATCCGAAATTTTTGCCTTATTGATAACACACATATATTTTTAAATGTCTCGCTT
ATGAGTAATCAGTCACGTAACGTATGTATAATTTCTCAGTGTAATTTCACGAAGGCAAGC
GCGTTGTCGCGTCCGGTTATTATTACCTTAAAATATACCGAAATATGTTCGTAACTGGCG
CTGCTGTGAAAACAATTACGGACGATTTTCAATAACGATTAGTGAGAATGATAAAACAGT
TGAACAAACAAAACGTACACGAGCAGTTGCTGAAGCAAAGGGAACTGTCAGAGGCGAAGG
GTAAACATAAATACGAGGGAATTATGGCCAATAGAAATGGAAGATGGTTGTCTCAGTCAC
ACGCATCGGCTAGTGCTGAACGCCGGGAGCATTTATATAAGATCCTCGTCATCGGCGAAT
TGGGTACAGGGAAGACTTCCATAATCAAACGATATGTCCACCAGTTCTTCAGTCAACACT
ATAGAGCAACCATCGGCGTGGATTTCGCACTGAAAGTACTGAATTGGGACTCAAATACCA
TAATAAGATTGCAACTATGGGATATAGCAGGACAAGAGCGCTTCGGGAACATGACGCGTG
TTTATTACAAGGAAGCAGTGGGCGCGTTTATAGTGTTCGACGTTTCCAGAGTGGCCACGT
TCGACGCTGTCGTCAAGTGGAAGAATGACTTGGATGCGAAAGTTCAGTTGCCCGATGGAT
CGGCCATACCTTGTATACTGCTCGCTAATAAGTGCGATCAACAGAAGGAAGGTATAGTCA
ATAGTCCCGCCAAAATGGACGAGTACTGTCGCGAGAAAGGTTTCGCGGGCTGGTTCGAGA
CATCCGCCAAAGAGAACATCAATATTGAGGAGGCAGCTCGGTCATTAGTTAATAAGATTC
TATTAAACGACAAGCTTCTTCAGAACAACGACACCAGGGACGGTGATAAATTCGTGATTG
ATCACAAAATAGCTAACGGTGACAGCAGAGATGGCGCGAACAAGGCTTGCGGTTGCTGAC
CAATCTGAGCGCGTCAGCAAACAATGAAGGACCAATCACGTCTGGCCATGATCGAATTAC
GAATGTTGATTCTTGTGGAGACGAATCATAATGATTTTTGATGTTTAACAGTTGTTTTTC
ATTGAATTAAATAATTTTAAGACTTGATACTTGTATTTATTGTCTTTTTTTCTTAATTTC
GCACTCGGGATTGCCATAAAGTGTTATAAATGTACAAATATTCCTGTTATAGTTATAATA
AAACAACTCCTGGCTTAATTAAATAACAGTAAAATTTTGTACAGGGAATTCTTAAAAAAA
TGGTGTATGATTTGACTGCTACTTCAGGCCACTTTTAT
(1358 bp)

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