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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c30379_g1_i5
Scaffold_idBomo_Chr22
NCBI non-redundant
(nr)		uncharacterized_protein_LOC101736037_isoform_X1_[Bombyx_mori]
Ontology
GO:0000978 F RNA polymerase II cis-regulatory region sequence-specific DNA binding
GO:0000979 F RNA polymerase II core promoter sequence-specific DNA binding
GO:0001047 F core promoter sequence-specific DNA binding
GO:0001077 F DNA-binding transcription activator activity, RNA polymerase II-specific
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006979 P response to oxidative stress
GO:0035035 F histone acetyltransferase binding
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046686 P response to cadmium ion
GO:0046872 F metal ion binding
Transcript
Level		FPKM:3.37 TPM:2.59
ORF EntryO_BomoASG18945_complete:A_BomoASG_c30379_g1_i5
Sequence
(Nucleotide)
TTTCAAAGTTCTAGCCTGCCACTGTGTACTTTTTTAATGAAAAACGCTTACTGTGATCAG
TTAAATAACGAAACATCCTCTTGCAGGCATGATGATTCGTCGGGAATGTCGTCGATCAAA
ATCGATTCTCAGAAGCATCAAATGGACAAAAACAAAAGGAAGACGGAGGACAACAACGCC
CGTTACAGATGCGAATACGACGGCTGCGAACGCACTTACAGCACGGTGGGCAATCTGCGG
ACACACATGAAAACTCACAAAGGTGAATACAGGTTCAAATGTCCAATGCAGTCCTGCGAG
AAGGCCTTTCTAACATCATACAGTCTAAAGATACACGTCAGAGCGCACACGAAAACAAAA
CCCTTCATTTGCGACAACAGCTCCTGTGGGAAGGCTTTTAACACTTTATACAGGTTAAGG
GCGCACCAGAGGCTACACAGCGGCGACACGTTCAACTGCAAATCGGATGGATGCGCGAAA
TACTTCACGACCCTGAGCGATCTCAAGAAACACATTCGGACCCACACAAAAGAACGACCC
TATAAATGTCGCATGGACGGTTGCGACAAGTCGTTCATAGCGTCTCACCATCTAAAAGCC
CACGGTCGGACCCACGCGCCTCCGCGGCACTTCGCGACCTTCGCCAGCGTCAGACCACAC
GTCGGCAAGCAACAGGCGGAAGCGGAAGTCGGAAACACGGAAGTAGCGAAACCTCTGAAT
CCGGAACCGGCCAAAACCGATATTATGTATTGGGACGGCCTGTTAGAGTCGTTCGGCAGG
ATCACGACAGAATCTAATTCGACCGACGGGAGCCTGGAGGACGTGACAGTGGTCAACAAC
GAATATATAACCGAATGGCTGTTCGAAGGCTGCGCACCCAAAGACGCATCAGCCTACGAC
ATTAACAGTATTGCGCTGTCGCCCTTTGACGTCAACAAAACCGATAAAAAATACGAAAAC
ACTTGGGTCGACGTTAACGGGATCCAACCCACCGTCCCGGTCGACAACGGTAACAAACTC
GAAGTCAGGTCCAAGGCAATCCAGCTCGCCCTGGCCAACGAGGTAGAGCTCCAAGCGCCC
TGGGTGGACGTGAGCGCTTTGGCCGCTTCCATATCCGAGACCCCGGTCACTATTAAAGAG
AAATCCCCCGAAAGCATATTCACGCTGGCCACGTCCGTCCCCACCCACATGCAGAGCTAC
ATCGACCTGAGCGCCGAGGGGCCCACCGCCCACGTCATGACACACGCGGCGCTGGCCCTG
GACACGCCCAGCGTGCGCGACGTGGCCGACGGGGTGTTCAACGACAGCGAGATCGTCACC
AACCTAGAGCCCGGCAAGATCGACGCCGACCTGGACTTGTTCTTCAAGTCGGACGACGAC
CGCTCCCTCAACACCCCCTCGCCCTCCAAGGTGCAGCAGAACATCGAAATAAACCCCGCC
AACTCCGTGCTCTTCAACACCGACTTGGATCTAGAGGACACTCTGTTGTTCGACAACGAG
CCGCCCTCGGACATGTACGTGGTCCGAACGGAGAACATATTCGGTAAAGAGATAGCGAAG
AGGAACGCTCTGGAGCAGGTGGCCGCCGACTGCGGGATCTGCAGCTGCGAGGGCTGCACG
TGCAACTCGGAGGGCGAGTGCAGGGACAGCAGCACGGTGGACACGTGCACGTGCGTGAAC
TGCGCGTGCGACCACTCGGCCATGACGTGCGCGGCGGGCTGCGGCAGCGCCACCGCCACC
GACCGCAACACGTTCCTGCACTACCACGAGAGGCACAACAGCACCACCAAACTGGAAGAC
CTCGGCATATTCACGCTGCGCGAGTGCGACGACACCGCAACGTCGGCGCTGAACAAGATC
AAGTGCTCCTGCGACGGCTCTACCAAGTGCAGCATCCTGAACGCCGGCAAGGACCCTTGC
TGCGGGGGCGCCAAGTCGTGCTGCGTCACCATATGCATCGACAAACTAGATGCATTCAAG
AAGTTCCTAACGGACAACAGCACCACCAAACTGGAAGACCTCGGCATATTCACGCTGCGC
GAGTGCGACGACACCGCAACGTCGGCGCTGAACAAGATCAAGTGCTCCTGCGACGGCTCT
ACCAAGTGCAGCATCCTGAACGCCGGCAAGGACCCTTGCTGCGGGGGCGCCAAGTCGTGC
TGCGTCACCATATGCATCGACAAACTAGATGCATTCAAGAAGTTCCTAACGGACAACAGC
ATGTTGGACGCGATGAAGGTCCGCAGCGTGGACGACGACCTCAAAGCATTGTTCACTGCA
TTTAACCAGTTTGTTTCTTGCGGCGATAAGGTTTGATTACGTGTCGAGCGCGGAGTCAGA
CTCGGCCCGCTGTGGGCAAAGCCCACATTAAGCCATGTCCACACTAAAGTGTGATGAAAT
TCATTGATGCCTTTTATTCACGAAAAAATAAATTTAAGTTCTAATTTTTCAAAATCAAAC
TAATGAGGTATTAGGGTTTGAAAACGTTGACAATTATAATACGATTTAACAACAGCATTG
CTTATGAAATATCAAGCCAGGTACAGACAGGACCGACATATTTCGGATGTTCTTAAATGT
TAACCGTCATCAAAGCTCCGTCGTTAGTGTGGTATAACACACATTTCGGTGCACAAATAT
GAGTATTATTTAGAGATGGAGATTTTTTATTTGTGCGAGATATTTTTTAATTGATATTAG
CGT
(2703 bp)

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