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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c30332_g1_i1
Scaffold_idBomo_Chr22
NCBI non-redundant
(nr)		E3_ubiquitin-protein_ligase_Hakai_isoform_X1_[Bombyx_mori]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0007162 P negative regulation of cell adhesion
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0030155 P regulation of cell adhesion
GO:0030335 P positive regulation of cell migration
GO:0045807 P positive regulation of endocytosis
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
Transcript
Level		FPKM:7.91 TPM:6.07
ORF EntryO_BomoASG18804_5prime_partial:A_BomoASG_c30332_g1_i1
Sequence
(Nucleotide)
GTCAATAGCTAGTGACGACTGGAATATTATTTTAAGAATTTAGCAAATTCAAATAATACA
ATAATTTAACTATCATTGATTGATGAAAAAAACTAATCATAAATCATATATTAATTACAT
TTAAATAGTATATAAGAGCGCTCAACAAAACCTAATAGCTTACATCAAGAGGTTAGCTTA
TGAATTTGTGGCTTTCATAAGTGAAACTGGAAATGAACACAGAAAAAAGGAACGGCCGTG
GACGAGGCAGAGGTCGTGGTCGCGGAAGAGGTAGGGGTAGAGGCAGAGGTAGAGGTAAAA
AAGTTCCTAAAGTAATGTCCAGTGACGAAGAGGAATGTTCTGTAGAAGAAACCTCACAAG
ATGCTGAAGAACCAGTAGTTGAGGAGCCTAAGGAAGAACCCGAACCGGTTGACCCACCCA
AACTGGAAGTTCCCTCAGACATATCACAATTAGAAGCACCGGTATTCACAACTTTGCAAA
GAGGACCACCTGAACCGATGCTGCGACTCGATTGGAGCCACCGAGCTACACTTATTGGAG
AGAAGGTCTTGAATCCAATGATATACTGCTGTGATACATGCTCCAAACCTATTCTTATTT
ATGGAAGAATGATACCATGCAAACATGTCTTCTGTTTATCTTGTGCTCGTGCTGATCACA
CGCACTGCCCTCGGTGTAGAGAGAAGGTTCTCCGAGTAGAACAAACCGGTTTGGGCACAG
TTTATATGTGCACACATTCCGGAACACGTTATGGCAATACAGGATGCAGGAGAACTTATT
TATCGCAGCGAGACCTACAAGCACACATCAACCATAGACACGTGTCATCCGGTAACACTG
AACCGAAAGTAGAACCGGAAACTCCATCTCCTTCCGTACCTGTGGTCAAACCTATTACAC
CGATGTCGGTGGGTACGAGCGACCCACGGGGGCACGGCCGACCCCGCACCAACCTCATCA
CCGTGCCCATACATGACCACACTGACCAGCACAACTATTACAACTATTACACGCAGCCCC
CGCCGTCCGTGACGTCGGTGCCGGTTCTGCAGTCGCTCAGCGTCCCGCCGCCGCCATACT
ACGCGCCGCCGCCCGCGCCTCACGCGCCCCACGCACCCCACGCAGCGCAC
(1130 bp)

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