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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c30330_g1_i3
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		ubiquitin_carboxyl-terminal_hydrolase_isozyme_L5_isoform_X2_[Bombyx_mori]
Ontology
GO:0000502 C proteasome complex
GO:0004843 F thiol-dependent deubiquitinase
GO:0004866 F endopeptidase inhibitor activity
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006281 P DNA repair
GO:0006310 P DNA recombination
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0010951 P negative regulation of endopeptidase activity
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0021670 P lateral ventricle development
GO:0030901 P midbrain development
GO:0031011 C Ino80 complex
GO:0036459 F thiol-dependent deubiquitinase
GO:0044822 F RNA binding
GO:0048853 P forebrain morphogenesis
GO:0061136 P regulation of proteasomal protein catabolic process
GO:0070628 F proteasome binding
Transcript
Level		FPKM:1.55 TPM:1.19
ORF EntryO_BomoASG18802_complete:A_BomoASG_c30330_g1_i3
Sequence
(Nucleotide)
AAATATAATTTCTAAAAAACACAAATTATCAACAACAAAAAGCCGAGCGAAGCTCGATCA
TTATTTAGTACGCCTTGATAGGCAGTCGATATATCGATGATTCGCGCACTAACGTCTAAT
GAATTTTTAAAGTAGATGTAAGCAATGTTCACGACGTTCAGGGTGAGAGAGGGGACGGGG
GAAGGCAGAGGGAGGATGATGCGCCTGCGGCTTGAGATTTGAATTCGTCAACCAGCAGCC
TGACACGCGTCAACATTTGATAATACAATGTATTTTACAAGTAATTAAATAAAACGATTT
CAATTAACTGTCATGCGTGGTTTCTTCTTCATCATCGTCATGTCCAGAAAATGGTGACCT
CGACGTGATTGTGAATTGAAGACGAAACTTTCTGACCGGACGGATCGGACGTGATGTGAC
GTGAGGCGAAAAGAAAAATAGCCCAATAATGTTGGTTGTTGGATCGCTCATACCTGACGA
TTGCACAGCTGGTGGATTGTCATATATAATGCTGCATTGAGCTCGTTAAAGCTATCCGAG
CCGCCAAGGAAACCCCAATCGAAGTGGAACAAAGAGAGCTAAGACGGGATCAGTGACGGA
CTGGACTAAGCGACTTGGCTGCCGCTGTAGGACACTTACAGCGGCCTTTATGACCTAAGG
CTAAAGCTCCAAAGATGGATTCTGCCGGGGATTGGTGTCTCCTAGAGAGTGATCCTGGAG
TTTTCACTCAGCTAATTCACAAATTTGGTGCCAAAGGTGTACAAGTTGAGGAACTGTGGA
CTATTGAAGACAGCATGTTTGAAAATTTGAGACCAGTGCATGGTCTCATTTTCCTGTTCA
AGTATGTTAATTATGAAGAACCCGCTGGGCCTATTGTATCAGATGATCGCTTAGACAAAA
TATTTTTTGCCAAACAGGTTATCAATAATGCCTGCGCAACTCAAGCTGTAATCAGTCTCC
TGTTAAATTGCAAACACCCAGATTTGGAACTTGGTCCTGAATTGACCAAACTGAAAGAAT
TCAGCATGACATTCGACTCGCGCATGAGAGGTCTCTCGTTAAGCAACTCACAGACTATAC
GCAGCGCACACAACTCAATGGCTCAACAGCCTCTCTTTGAAGTAGATCCTAAAATGCCTG
CCAAAGATGAAGACGCCTATCATTTCATAGGATATATGCCAATTGATGGCCGTCTTTACG
AACTGGATGGGCTACAAGAAGGTCCGATTGATCATGGTGCAGTTGCTCCGGAACAAGATT
GGCTCGATGTTGTCCGTCCAATTATAATGAGAAGGATTAATGTATACACCGAAGGAGAAA
TTCACTTCAACTTGATGGCCCTCGTATCAGATCGTAAAATGATATATCAACGTCAGCTTG
ATACACTTCTTAATGAAACACAGTTGCTGGGTATGGAAACCGATGCTCTCGATACAGAAA
TAGCGAGACTGAGAATGTTGATTGATTATGAGGAAATAAAGATGGCAAAGTACAAACAGG
AGTTGGTACGCAGGCGTCACAATTACATGCCGTTCATCATTAATTTGCTTCAAATACTGG
CTAAGGAGAAGAAGCTGATGCCCCTGCTGGAGAAGGCCAAGGAGCGCGCTACCAAGCGGA
GTCACAAGAAAATGAAAGTATAACACGAGCATTCCCGCGGGCCGAAGGTGGAACCACCCA
CCCGGAGCCCGCGACGCGTGTCGCGACCAGCGTCGCCACGCGTGCTTCCGTTCACTGACG
ATTTAGATTTAACTTTACCCGACTTAGAATCTGTGTACACTGAAAATCCAGACTTACAAC
CCGAAGTTGAAAACTTAGTGGAAATGCAGGACGTTGAGGTTTCAGAGCGCGCGCAGCAAT
TACTCGAAAGCGTGCAAGATGATTTGATGCTCCAACCGCAAGACTCGACCGATTCCCTTG
ACGTAGATTTGAAAGAGTATAATGATTTCGAAAAATCTGATGATTTGTAAATTTGTGTAT
TTGTGATCGTGTTGAAAAATAATAATATTAAAATTTAATGAGGATTTAAATAATTGTGAC
AATGAATTTAAATATTTTGAGAATAATTCACTATTTTAATTTGTAATTGACATTAAAATA
AAACAATACATTTATTTATTATGTAGATTTAATATCTTATCAATATTTGTGTAGCTTACT
GAACACAGACACATCAGGAAACATAATGAAAAAAAAAGATCGAGTAACAGCAAAATATTA
TTGGAGAGTGCTTGAAAAAATATAAATAAAAGCTGTTTAATATAACCGTCAAATTACATT
ATCTAAA
(2287 bp)

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