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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c30294_g1_i1
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		protein_SMG5_[Bombyx_mori]
Ontology
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006406 P mRNA export from nucleus
GO:0031625 F ubiquitin protein ligase binding
GO:0032204 P regulation of telomere maintenance
GO:0032210 P regulation of telomere maintenance via telomerase
GO:0035303 P regulation of dephosphorylation
GO:0042162 F telomeric DNA binding
GO:0042826 F histone deacetylase binding
GO:0051721 F protein phosphatase 2A binding
GO:0070182 F DNA polymerase binding
Transcript
Level		FPKM:21.50 TPM:16.49
ORF EntryO_BomoASG18692_complete:A_BomoASG_c30294_g1_i1
Sequence
(Nucleotide)
GACGGATATGTCCATGCAAGGAAAATGCATAGACCTATATAGTTCATTGGGAAAATGATA
ATAACGAAATGTTTTTCGTTGGCATATTTAATAAAGTAACACATTGAAGTTAAAGGAACT
TTCTTTTTTAAATCAACATTTTGGTCAGACGATAAAATGACTTGAAAATGAAGAACGGAT
GTCTCGATTTATCAGAGGCCAAAATTGCGGAGCGCAATGAACGTGCCAAGAAACTTTATC
GCTATTTAAGTGATGTAGCAAGACGTATCAATGACATGTCGACTACAAGTAAATTTGTGG
CAGACCTCTTTACTACTAACATTGAAGTCCAGAGACAAAAGCTGAGGGACAATTGTGAGA
AGTTACTGTTTCTAGATCCAATTAATTACGGCAAGAAAGCACTTGAACTACTATGGAGAA
AAGTATATTATGACACTATATCTACTGCCAAAAAGTTGAGAACTGATAGTGAGCATGACC
ATTTCCTGTTCACCCTCATCCAATGTGGAATTGGTAATTTTCACCATTTCTTAGATAGAA
TTCATTATGAAATGAAAGTAGATTTCAAGGAGTTAGATTATATGCCCAATACTGAAGAAG
ATGAGTTGCAACTATCTTCTGGTAATGTTGAACTATCAAATTTTGGAAAATCTGCTTTGC
ACTCATGTTTGATATATTTAGGGGATTTAAGTCGTTATGCAGTGGAAATATCAAATCACT
TTGAACCAACAATTGCTGCTCGATACTACTTACAAGCTGCTCATACTGACTTTACATTGG
GAATGCCTTATAATCAATTAGGAAACCTTTATCTTGAAAAAAATTACAACTTGGATTCTG
TATGTTTTTATATTCACTGTCTTAATTCTAAAAATCCATTTGAAGGGGCCATGGGTAATC
TTACAAAAATATTTGAGAAAAATGATCAGTTTTACCATACAATAAATGAATCAGATACTT
TAACTCAGGTTGAACATATACAAAATACAATTGTGAATTTTCTTTCATTAATTGAGATAT
GGTACTTGAACAAATCTGATTCTGATATTCCTCAGCGCTGCAGCAAAATCGCACAGCAGC
TAAAGATTTGTATGGAGTTTAATGAAGCCACACTTCCTGATATTGATAAAAATTATGATG
ATTATCTATCAATTTTGGAACATGAAACCAATTTTCCATCTTATTTAAATCCAAATCTAA
TACATCGTATGGTTCTGATTTGTTTATTCACAGTCTCAAAAATGACAGAAATTGATGAAA
CAAAAGCCTTTGCATGCAAAGCTTTCACTCTTGCTCTTTTGTCTCAACTTTTGTTGAAAT
TGCTTAAGCAATTGGATTCAATTGGTTTTGTAAATCCTAGGCAGATTCATAATTATGGAT
CTTCAAAACCACACAATGAACAAACAGAAAAATATGAGAACAATAATGATGAAAATAAAG
AAATTATAGAAAGCACAGTGAACAATGGCCAGAATGCAGAACAAGAATTGGAGGAGCAGA
AACAAAATAATGTAAAAGAAAACAATCTAAATGGTCATGCTAAGCATGCAAAGAAAGCAC
TTATGAAACGTCGTCGCCGTCGACGCATTGCCTCTTCAGAAAGTTCTGACGTGAGTGATG
CTAATACTGAAAGCAGTGATTTAGATGAAATTGAACATTCATACAGCGACTTGTCAGATT
CCTCTGATCAATCTGTATCACTTAGTGAAGCTAGCGATTGTGATGAAGTTAACGATGAAA
CTAAAGATGAAAGTAGTGAACAAATTAATGAAAAAGTAGAACCAAATAAAATATTGAATG
ATGATATCACCTCAAAGATTACAGAAACAAATTCACTTAATTCATCAAATTTATTGAATT
GTAATACAACAAAATCTCAGGAAAACAGCAAAGTAAACACTATAGAATTGAAAACTTTTT
TACAAGGAAACAATTTCATGGCCAGTATCAAGCTGTTGTTGGATTGGATTTTGATTGAAA
AAGATTTAATTCTTTCATGTGGAGACAGCGGAGAGTCCTTGTTTCAATGCGTTGTAGATT
TGTTAAATATTTTTACATTTTATTTCAATACAAAATCTGATGAGGGGACTAAAGAAGATT
GTGAATTAATAAAGTACATTAGAAATTTAGTCATGAAAATGAAACTTGAATACAAGACAA
TACCCTTACCTGAAGATATAAATTTACGGGGAACAAACATTTGTAAATTTGATAAAGATG
CTGCTGAATGGCACATCTTAGAAAAGTATAAATTATCTGTTTATGAAGAAAACGTAATAA
GGATTCTTAACTTCATAGATTTTGGGAACCAGATAGCTAAAATTATACCCAGAATAAGAT
TTAACAGGACCATGAAATTGTTTTATCTAAAAAACATTCACCCTCCTAAATTGAATACCA
AAATTAACCATAAAAGAAGTAGAGAATGGCATTCAAAGAAAAATACTGAATCGAATGAAA
GTGGATTACTACGGCGCCTTGGTCGACTATGGTTGACATCACAAGTACGCGAGTTGGAAC
GCAGCGGACAGTCGGCGGCACCTGCATTACTCGTACTTGACACCGCAGCTCTTAACAAAC
ACCTCCGTCGTGTCAAACAGCTCCTACTCACAACCAACTTTGTGCTCATGGTGCCTACAG
TTGTGCTACAAGAACTGGACAATTTGAAGCGAGAGCAGAGCACAGCACGTAAAGCTATCC
GTTGGTTGGAACTTCAATTAAAAAATGGCTCAAGATTTCTACGAGCACAACGTCCGAACC
AGTCAAAGCCCCTGCCGCTCTTGAAATATCCCCGTAAAGCTCCAGCCCATATTAATAACT
TTATTCAGATTTTAGAGTTCTGCAATCATTTCGTAGCGGAAGATAAAAAGACGCAAGGAT
CCGGTGATGCTGAAAACGTTTTACAAGGGAAGTCTTCGTCCGTCCTTATACTACTCGTTG
GCAATGCTGATGAAGATGAAGAACAGTATAAAGAATTTAGTGTTATGGGCGCAGCGCAAT
CGGCCGGCATTTCCGTAGAAAACATCGTAGATTTCTACAGCAAATGGCGACAGACATCGC
ATAAAAACGGTAAAAAGAGGTGAACGCGTGTCGATCACGAGACCGGTTTTGATCACTATG
GAAAGAATGGACTTCGAGGATATCGATAAAACGTCAAAAAGCTCTTGCGAGGTTTTGATA
GGACACGTCCAAAACGCTCACTATACACTATACAAAAAAAAAAAAACTAATAATGTTTTC
ATTGAAGGTAGCGCGGAAAATTTTCTATTGATGTATTGTATCAATAATAAATTTTTATAT
ATCGGTGTAACATTATATAACCATCCATAAATTCATAATTCATAATGTATTCATATAGCA
T
(3361 bp)

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