SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c30205_g1_i1
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		25S_rRNA_(cytosine-C(5))-methyltransferase_nop2_[Bombyx_mori]
Ontology
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0008150 P biological_process
GO:0008168 F methyltransferase activity
GO:0008757 F S-adenosylmethionine-dependent methyltransferase activity
GO:0016740 F transferase activity
GO:0032259 P methylation
GO:0044822 F RNA binding
Transcript
Level		FPKM:19.55 TPM:15.00
ORF EntryO_BomoASG18412_3prime_partial:A_BomoASG_c30205_g1_i1
Sequence
(Nucleotide)
ATCTCTACCAGCACGTGTGAACTTTGCAGTGTTTTTCAAGTAGGTACATAATCAAGTTAT
TAATAATTAATTGAAGTGGAAAATTAGTTGTCGAAAATGGGTAGAAAAGCGAAATTTGAT
GAGACGAAAAAAGTGAAAAAAGGTCCTGGAAGGAAAGCAAAAAAACAGCCCGATCCAGTA
TTTAGAAAGGAGCTATTAGAGACTGAAGATCAGGTGAAAAACTGACTCACAGGCAAAAGC
AAAGGGCCGCAAAACGTGCCAAAAAAAAGGCTGAAATAGTTGAAAAAAGAAAAGCTATAA
AACAAGGCAAGAAAAATGAAGCTAAAGAAATTGAGACAAATGACGAAGACATTAAAAAAC
CAGTTGTAAAAGGTTACTCTGATGACAACAAAGAATGGCTGAAACCAAAACAGAAGGTTA
AACAACAGAAAAAACAAAAAGATTCAGACAGTGACATTTGTGATCAAGATGAGGGTTCAG
AGATGGAGCAGGACTCTGAAGCTGAAAGTGAGCATGAAGAAGAAACAAAAACTGTCAGTG
AAAAGTATAAGGTGGGAACTCTTGATGATCTATTCAAAGATTCTGATGAAGAGGAGGCGG
ATCCAAGTTCAGAAGAAGAAGGATCTGTAAATAGTGGCAATGCAGGATATAATTCTGATT
CAAGTGAAGAAGAATCTGATGAGGATGGTGATGATGAGGATATGCTGCCTATTGAAAAAG
CAAATGTGAAGCTGAAGAAGAAACAAAAGGAGGAAAAGAAATTGGCAGATGAGGAAATGC
AATTGAATATATCAAAACAAGATGTTTTTGCTTTCCCTTCAGAAGAAGAGCTACAGAATC
CTACCAGCCTTCAAGATGTACAACAAAGGATCAAAGATGTAGTCTCTGTTTTGACAGAAT
TTAATAGATTAAAAGAGGAAGGGCGTTCAAGATGTGAATACACAGACTTATTACTTAAAG
ATCTTTGTACCTATTATAGTTATAATGAGTTTTTGATGGAAGTTCTTATGCAAATATTTC
CTGTACAAGAATTAGTGGAGTTTTTGGAAGCAAGTGAGATTGCTAGACCTGTGACGATAA
GAACTAACAGTCTCAAAACTAGAAGAAGAGATTTAGCCCAGGCATTGATTAATCGAGGAG
TCAATTTGGACCCAGTTGGCAAATGGAGCAAGGTTGGCCTTGTTATTTATAGTTCCACAG
TACCTATTGGTGCAACGCCTGAGTATTTAGCTGGTCACTATATATTACAAGGTGCATCAA
GTTTTTTACCAGTAATGGCATTAGCCCCTCAAGAAAATGAGAGAATATTAGATATGTGTG
CTGCTCCAGGTGGGAAAGCGTCACATATAGCTGCTATAATGAAAAATACTGGTGCCTTAT
TTGCAAATGATGCAAACAAAGAAAGAACAAAAGCAGTTGTGGGAAATTTCCACAGATTGG
GTGTAGTCAATGCTGTTATATGCAATTATGATGGTCGACAATTCCCTGAAGTTATTAAAG
GGTTTGACAGGGTATTGCTTGACGCACCATGTACTGGTACTGGGGTAATTGCTAAAGATC
CCAGTGTAAAGACTACGAAAGACCAGAAGGACATACAAAGGTGTTTTAATTTGCAGAGGC
AGCTATTGTTAGCTGCAATTGATTGTTGTAATGCCAAATCAAGTACGGGCGGGTATATTG
TGTACTCCACTTGTTCTATTTTACCTGAAGAAAATGAATGGGTTGTAAATTACGCATTGA
AGAGACGAAATGTGAAATTGGTTCCCACAGGCCTTGATTTTGGAACTGAAGGTTTTATGA
AATACAGGCATCATAGGTTCCATCCATCATTAAAATTGACTAGAAGATTTTATCCTCACA
CACATAATATGGATGGATTCTTTGTCGCTAAATTAAAGAAATTCTCCAATGTCATTCCTG
AGGCAGTTATAGATGATGATGATAAGGAAACCGAAGGTGCAGATGAAGAAACAGTTGTCA
CAAACGAAGGAGATCAGTCTACAGATGCCATTTCTAATAATGTAACTTCCAAGGTCAGTG
GCCCCCAGAAAAGAACTTTGGAGCCAGAGTCGAATATAGCTGAGCCACAAACAAAGAAAA
TGAAAGGTGAAAATGCAAAAAGTTCCACTGGAAACGCTGCGGTCAATAAGAAAAATAAAA
ATAAAAATAAGAAGGGACCTCAGTCACAGAACCTAAACAACTCAAATAGTAGAGTTCAGG
GTAAAATGGGCAGTGCAGAAAAATTGCAAAACTCAAGAAAGCAGCAAGAACCCTCACTAC
ATGGTCAAGGAAAGCAACATGAAAAGAAAAATAGTAAACTTGGTAAAAACAGAAAAGTAA
ATGGTCTGACTGAAAATAAAAATAAAAAGGCAAATGAAAACAAACCTAACAGTTCCAATC
CAATGAAGACAACAAATAAAAAGCATAGTAAAATTAATAAAAATCAC
(2447 bp)

- SilkBase 1999-2023 -