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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c30178_g1_i1
Scaffold_idBomo_Chr6
NCBI non-redundant
(nr)		cadherin-99C_[Bombyx_mori]
Ontology
GO:0001750 C photoreceptor outer segment
GO:0001964 P startle response
GO:0002009 P morphogenesis of an epithelium
GO:0005509 F calcium ion binding
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0007015 P actin filament organization
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007601 P visual perception
GO:0007605 P sensory perception of sound
GO:0007626 P locomotory behavior
GO:0007628 P adult walking behavior
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0032420 C stereocilium
GO:0032421 C stereocilium bundle
GO:0035058 P non-motile cilium assembly
GO:0035264 P multicellular organism growth
GO:0042491 P inner ear auditory receptor cell differentiation
GO:0048839 P inner ear development
GO:0050910 P detection of mechanical stimulus involved in sensory perception of sound
GO:0050973 P detection of mechanical stimulus involved in equilibrioception
GO:0051017 P actin filament bundle assembly
GO:0060013 P righting reflex
GO:0060088 P auditory receptor cell stereocilium organization
GO:0060122 P inner ear receptor cell stereocilium organization
Transcript
Level		FPKM:3.11 TPM:2.38
ORF EntryO_BomoASG18311_5prime_partial:A_BomoASG_c30178_g1_i1
Sequence
(Nucleotide)
ATCAGCACCAAGACCAAACTCGACTATGAGAAGACGAAGGAATATTCTTTCGTGGTAACA
GCGACAGATGGCGCTATAGACAAACGTCTGGGAACAGCGTCGGTCGCTGTACAAGTACAA
GACATACCCGATGAAGCGCCAATATTTCCTTTGCCGCTGTATTCGGTTCATGTACCGGAA
AACGTGCCCAATTACCCAGTCGTTAAAGTTCAGGCAGAAGATCCCGATACATCTCCGGAG
ATAACGTACACGATAATGAAAGGCGATATGGATCTGTTTTCGATCGACCGCAAGTCGGGT
CTGGTAAGGACTCTGCAGGCCTTAGATAGAGAAACATCGGCCCGACACGAACTCATTGTT
GGCACCGAAGAGAACAGCGAAGAAGGACCGGGCGCGACCACAACTATAGAGATTGTCGTT
GATGACAAGAACGATAACTCGCCCATATTCACGTCAGTGGTCCGACCGGTCACGGTGGAG
GACTCATCGTCTATAGGGAGTCTCGTGCAGACGGTCGTCGCCAGTGACGCAGACGCGACG
TCACCGAACAACAGAGTCCGGTACAAACTAGTGGGTCGGGGTAAAGCGTCCAAGTACTTC
CACGTCGAACCCGACACCGGTGCGTTGAGGGTTCGCGATGATCTGAAGAAGGAAACGGAT
AGCGAGTATACGGTGGACGTACAAGCTTACGACCAAGGCGATCCGGTCATGTCATCGGTG
ACCAGTCTAACGGTGTACGTGAGCCATTCGGCAACCGTTCCACCTGACGTCGGCTTAGGT
TTCGCTGATACAGTGTATACGGAACACGTTGCCGAGAACTCGCCCAACGGTACCCTAGTT
AGAGTGTTGCCATTACTCAATAAAAGGGAACATTCCCCAGACACGCCTCTAAAATGCTTA
CTCACAGAATCTTCGCAAAAAGGGATATTCTACGTGAAGCTGACAGAAGACCGCGACTGC
GCGATATACCTTAACACGAGTTCGCTAGACTACGAGACACTATCGGAGTATTCTCTGGAA
GTACAACTGGAGTCCATACAGGGTCTGATCAACCCCGACAGTAGTAGAGCGCTCGTCAAA
GTTCATGTGACCGACGTCAATGACAACCACCCCGTGTTTGTGTTCAACGAACAGTCCACT
GTGGCCGCCGCGAAAGGGAAATACTTCGCTATTGTCAATAAAGAGATGCTTCTGGGCACC
AACGTTCTTCAAGTAAAGGCGAAAGATCGGGACAGCGGCGCTTACGGCAAGTTAGAATAC
CACAAGAACTCGTGGACCGAAGCGGCCGAAGAGTACTTCGGTCTGGACGCGGACACGGGG
ATCATAAGCAATATAAAATCGTTCGAGAACGTTCCAAAGGACATTCTGCCGTTCAAGTTC
AGCGTGACCGCGAGAGACAACCCTGATTCGCCACAGGACTATAATATAGCCAGAGCGTCG
GTTGTGATAAACTTATTACAAAAAGAGAATCAACTGGTATTGGAAATAGCGGATTTGAAT
CCGGATGCGATGCGCCGGAGAGCCAGAAGTCTTCTATCGGTCATAGAAGAGAAGAGCGGT
TTGGTCGCCGGCCTAGAAAAGTTAACGTCGAGACATTATCTAGGAGAGAATGGTACATTG
GAGAGCGACAGCCGTGGGACCGACGTTTGGCTCTACCTAATCGAACCTAGTACTGGCGAA
ATATTGACTAGAGAATCTATGCCTGTGCAGAAGGCCATAGAGACTGGGGTCCACAAAGCG
GTGGCTGCTCAGCTTCAGTCTCCAGTCAGTGAAGTTCGAGCTCCTTTATTAGCGGCCGAA
TTGCCGAAGAAGCCTCACATAGCAGCCGCGCCGCTCGCCACGGCCCTACCCGCCGCCCTG
ATAGGCCTGGCCGCCGTCGTACTGGTCGCCGCACTGGTCGCCACCATCTACATCTGCGCC
TCATGGAACAGGTATAAGAAACACAAAGAGCAAGCGGTTCAACAGTACGGAACTCTGAGT
ATGAGCATGCCGCCTCCTCGTCCTCCGTCTGGCTACGAGTCCAGTGAAGATGACCCCGCA
CCGAGATATGAAACACAGGTACTCAATATGGCGGTCGATGACGCGGATCTGCAATTAGAC
TTCAGTCCAAACAATCACGCGTTCAATATACACAACGTTCAATATTTATCCAAAGATAAT
GGTGAGAGAAGTCCAACGTTATCGGAAACAGCGACGACAGCTCGAGCCTCGAGCGTCAAT
GAAAACGGGGGTACTCTGAACAAACTCCACAACAGCCACTACGATCCTATCGCGAACAAC
GCGTCCATAGCGCGCAACACACAGACATTGAACCGAAGGATGCCGAACTCGCAAGCGTTG
AACAACGCTCTCGGGACATTGCCCCGTGCCAACAATAACAATGTCGGTGGTGGATTATTA
GCCGCCACATTAGGTAGGAAGATCAACGGGAATAATCACAAGAAGAAAACTCAACCCATA
ATGGCGTACGACGATATACCCGGAATGCAGAAAGCCTCTGACAACGACAACGTGACATTT
GGCAAAAGAAACTTCTCTGGGTACCCATACGATCAATCGACTGTCGAAACTACGACAGAG
TTATAGTGAGAAATTTGTGAAACAATAAAATAATGATATCGAACATTGTAAGATGAAATA
TCCGT
(2645 bp)

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