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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c30177_g1_i1
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		probable_ATP-dependent_RNA_helicase_YTHDC2_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0004004 F RNA helicase activity
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0006396 P RNA processing
GO:0008186 F ATP-dependent activity, acting on RNA
GO:0016787 F hydrolase activity
GO:0034612 P response to tumor necrosis factor
GO:0044822 F RNA binding
GO:0044829 P positive regulation by host of viral genome replication
GO:0070063 F RNA polymerase binding
GO:0070555 P response to interleukin-1
GO:1990247 F N6-methyladenosine-containing RNA binding
Transcript
Level		FPKM:3.76 TPM:2.88
ORF EntryO_BomoASG18308_complete:A_BomoASG_c30177_g1_i1
Sequence
(Nucleotide)
GAAGGATGATTTAAGCAGCTGTCCTGAAAAGGAAAGAAGCCCTCAACTCTCGCACAAGAG
TTTGGGGCAGCTCAATAATGGAGTTGCACAGATTCCAAACACAACATACAATCCAGATTT
ATTGAAATTCAGAGAGAAACTTCCTGTTTATGAGCAGAGGCAAGATTTAATAAATGCCAT
CGTTCACAATCAGGTCATTATAGTAGCCGGAGCTACAGGGTGTGGAAAAACAACACAGCT
TCCACAACTGGTGCTGGAGTATTGTCAACAACGTGGTCTTCCAGCCAGACTGTACTGCAC
CCAGCCGAGGAGAATTTCAGCTGTGTCTGTAGCCGAAAGGGTGGCGTATGAAAGGATGGA
GAAAATAGGACAGTCAATTGGCTACCAGATCCGTCTGGAGTCGAGAGTCAGTCCTCGAAC
GGTGCTCACTTACTGTACCAACGGGGTGCTGCTCAGGACCCTCATGGGAGGAGACAGTGC
ACTTACTGGCGTGACCCACATACTGGTGGACGAGGTCCACGAGCGCGACAAGTTCAGCGA
CTTCCTGCTGATCGCCCTGAGGGACGCGCTGCCCAAGCACAAGGACCTCAAGCTCGTGCT
CATGTCCGCCACCATGGACACGCAGATATTCTCCAGGTACTTCAACAACTGCCCGGTGAT
AACCATTCCGGGGCGGCTCCACGAGGTCCAGCGGTACTATCTCGAAGACGTACTGAAGAT
AACCAAATACAGAACGCCGAAAATGGTTCAAGTTGAAAAGGAACTGAAGAATAAATTGAA
GTCTGGCAGGAGCTACTGGTCGCAGCTGGAGACTCAAAAAGCCGAAGACGGACCAAGCAA
GGAAGTTAAAGAAGAAAAGGAGAATGTTCTGGATGCAGGTCTGCAGGCAGACATGGACGA
GTTCATCGATGAATGCTTCAAGGAAGGCAGCTTGGACTCGTTCTGCCAGCTGCTGTACAT
GTACCTGTCGGAGGGCGTGCCCGTGCAGTGCGCGCACAGCCGCTCGGGCCGCTCGGGGCT
CATGGCGGCGGCGGCGCGCGCCCTGCCCGAGACGCTGCACCAGCTGCTGCACATGGGTGC
CGATCCATCCGCCAAAGACAAAGACGGCAAGACGGCATACGACTACGCCGTGGACAGCGG
ACACGCCGAGTCTGCCAAGCTACTCGCCACCTTCAACCTCACCGAGGACTCCAAGGAAAA
CCTGGAGGACAACGACGGCGACAACTTCCTCCTCGACGTCTACCACCACACCTTCTCCGA
GGAACTCATAGACCACGATCTGATGCTGGCTCTCATAAAGTACATCCACGTCACGCTGCC
GAAGGGGAGCATACTGGTGTTCCTCCCGGGCTACGACGACATAGTAACACTGAGGGACAT
GATCCAGTCTTGTCCGGAGATGAACGCCCAGAAGTACCAAATGTTCACGCTGCACAGCAA
CATGCAGACGGCCGACCAGAAGAAGGTGTTCAACGCGCTGCCCAACGCCAGGAAGATCAT
CGTCTCGACCAACATCGCGGAGACGTCCATCACGATCGACGACGTGGTGTTCGTGGTGGA
CTCGTGCAAGGTGAAGGAGAAGTACTACGAGTCCAACGGCGGCGTGTGCACGCTGCAGTG
CGTGTGGAGCTCGCGGGCCTGCTGCCAGCAGCGCGCCGGCCGCGCGGGCAGGACCAAGCC
CGGCCACTGCTTCCACATGTGCTCCAAGCGACGCTTCCAGACCCTGCCGCTCAACTCCGT
GCCGGAGATCCTCCGCGTGCCCCTCCAGGAGCTGTGTCTGCACACCAAGCTGCTGGCGCC
CGGGAACACGCCCATCGCTGACTTCCTGTCCAAAGCGTTGGAGCCTCCCTCGTTCCTGGC
CGTCAGAAACGCGGTCACGTTACTGAAGACCATAGGGGCTCTGACCCCCATGGAGGACTT
GACGGAGATCGGCCAACATCTACTAGACCTGACCGTGGAGCCCAAGTTAGGGAAGATGTT
GCTTTACGCGTGCGTGATGAAGTGCCTCGACCCTATATTGACCATAGTGTGCAGTCTCGC
GAATAAAGAACCTTTCCAAATATCTTTGAACCCTGAAAACAGGAAGAGAGGAAGTGCGGC
TCGAAAAGAGTTCGCAGCCGACAGCTACTCCGACCATATGGCCTTGTTAAGAGCTTTCCA
AGCTTGGCAGACAGCGCGAGCGAATGGAAACGAAAGAGCTTTCTGTACGAAGAACCTTAT
ATGCGGAGCCACCATGGAAATGATCGTGGGATACAGATCTCAATTGCTGGCCCAATTAAG
AGCACTGGGACTCGTCAAAGCTCGAGGATCGGGAGACATCAAAGACGTAAACTTGAACTC
TGAGAAGTGGCATGTGGTGAAAGCTGTGCTAGTTAGCGGCCTGTATCCGTCCATAGCCCG
CGTGGACAGGGACACCGGTACTTTGCGAACTTCGAAAGAAGTCAAAGTGGCATTCCATCC
CAGTTCCACTTTGCACAAGGGCGGCGGTATCACGGGCTCCCAAAAATCGGTCATCAATGT
TCCTACCGACTGGGTCGTGTTCGAAGAGATCTCGCGAGCGGGACGGTTCTGTTTCATTCG
GTGCAACACCCTGGTGACGCCGCTGACCGTGGCGCTGTTCGGCGGCCCGCTGCGGCTGCC
CCCCGGGGCGCTCACCCAGCGCGCCAACCCCCCGGGGCTGTCCAGCGACTCGGACAGCGA
GGCCGACGAGAGCAACGCGTCCCCGGACACGGCCGTGCTCGCGCTGGACGACTGGATGGC
CTTCACGGCAGACGCGTCCGACGCCATCAGCGTTTGCTACCTGCGACAGAAGCTCTGCGC
TTTGGTCATCAGACGCATGTCGAACCCGGCCAAGCCCACGACGCCCCTGGACGACCAGAT
CCTGAACACCGTCGTCCATATCCTCGGAGCCGAAGAGAAGAACGTGGGCTTGAGTCAACC
GAGCGGCATCGGCCAACGTCCCAAACCCTTGACCTTAGACTCGCCAAACTGGAGAATGAG
GGTGGAAGAAGATCAGTACAGACACGACAAGTACTACCCGCAGTACAGCCAGCCGGAGTA
CCAGAATACCTTCTACCCGAACTACTTCAGGAACGGCCAGGGAAGGCCCGGCTGGAGGGG
CGACGTGATGCCTCAAGGCTTCTCGCCGCAGTACAATGGCCCTAAGAGCCCTATGTCTCC
GAACGGAAAGGTCATGATGCCCAACATGGAGAAGTACGGCGAGGGCGCGGAGGGGAACGC
GAAGCAGTTCATGATAAAGGTGGACGAGCTGCACGCGCTGGAGGCCGCCTACAGCACGGG
CAGCTACGTGTTCGCGCAGAACATCGCCAAAAGACTGCAGAAAGCTAAAATGGAGGGTCA
TCGTGTAACAGTATTCTTCTCGTGTCCGAGCGCCAACAAGTTCGTGGGCTGCGCGAACCT
TCTGGACGTCAGCGGAGCCCTAGAGTGGATCTCCACGCAACACGTGCCTTATCATATGGT
TCGACACTCGTGCGGGGAGATCGGAA
(3506 bp)

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