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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c30156_g1_i4
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		pre-mRNA-processing_factor_39_[Bombyx_mori]
Ontology
GO:0000243 C commitment complex
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000395 P mRNA 5'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030627 F pre-mRNA 5'-splice site binding
GO:0071004 C U2-type prespliceosome
Transcript
Level		FPKM:1.14 TPM:0.87
ORF EntryO_BomoASG18262_complete:A_BomoASG_c30156_g1_i4
Sequence
(Nucleotide)
TACTAGTTTCGCGTATCGACCACCGGATCCTATCCGATCCCGACGACTGACCTAATATAG
TCCTCTAACGAAGACCTTCAAAGTGCAATCCTGCGAGTACTTGAGAGACGAAAAGGCGAG
ACAACCTCTTGGTCTACTAGAATGAAATAAACCTTTTCGGCTACAATAATTAAAAAACTA
AATAAAAATTAGTACTTACAATTAACATACCATACATAAACAATATGTTCATTAGGCATC
CGATGAAGAGGCGCAAGCCATCAAGGAACGGATTGTTGCAGCTCGAAGAAAAATTCATAA
AACGACCGGCGAAGAAGTAACTGCGAGGTGGACTTTCGAAGAAGGAATCAAGCGGCCTTA
TTTCCACGTGAAGCCCCTGGAACGTTGCCAGCTAAAGAACTGGAAGGCGTACCTCGAATG
GGAGAAGCACCACGGTTCGTTCAAGCGAGCCCTCGTGCTCCACGAGAGATGCCTCATTGC
ATGTGCCTTATATGAAGAATTCTGGATGAAGCTTATAAAGTTTCTGGAAGAACGTGCTGA
ACAAGATCCTGAAGTGATAGCAATAGAACGGGAAGTACTAGAGCGAGCCTGCACAGTGCA
TCACCTCGACAAGCCAGAGCTCCACCTACACTGGGCACACTTCGAAGAGGTGCAGGGCAA
TACACTGAAAGCTGCCGAGATACTTGATCGTATAGAGAAAACCTGTCCCAATCTCGTACA
AATACAGTACAGGCGAGTGAACCTCGAGCGACGACGCGGCGACTACGAGAAGTGCTCTCA
GCTATACGAAACGTACATCAGCACTTCGAAGAACAAGTCGCTGGCGTCTGCGCTCGCCAT
CAAGTACGCGCGGTTCCTGCAGCACGTGCGCCGCCAGCCCGCCGCCGCCCGCGCCGCGCT
CGACGACGCCGTCGCCAAGGACCCGCTCAACCCGCGCCTGCACCTGCAGAGACTTGACCT
CGCCATCAACACTCCCGGCGTCACCTACGAAGAGTTGGATGAGCTGGCACAGTCGTACTC
GAGACAGGAGGGCGCGGACACGGAGGTGAGCGCGCACATGGCGTGGCGCCGCCGCGAGCT
CGCGGAGGAGCTGGGCAGCGCCGCGCACGCCCGCGCCGCACACGCGCACGCGCGCGCTCT
CGCCAAACATCTCCGCAAGCGCGCCCGCAAAGACAAGCACGACCCGCCGCCGCCGCCAGC
AGTAACTGATTCTAAGAAAAAAGAGAGTACGGCAACCGCCAATTCTGTTCCGACGACGAA
TGCGAATTACTACGCGCCGACGACAAACACGCAGTCCTACGACCAGTCGTACACGCAGTC
CTACCAGCCGACCTGGGGCTACCAGCAGCCCCCCGGGCCCTACCAACACCACCCCCACGC
CTGGCCGCAGTATCCCAACTACTATTAGTAATTTGAAGAACATTCGTGATGGACGTACGA
ATCAGTACATACTTTTGATTTCAGTCACCTTTTTCTCCATGTATTAGGTTAGGTTAAGAT
TACGTTTACAATTAACTTTAGAATGTAGCTACAGGCTTTAGATAAGAATTATAGCTACTA
TATTAGTAATTAAAATAATTTGTTTGGATAAACGTATGTTCGTGAAACATAATGTAGTTG
AGGTCGGATTTTTTTATAAATTAAAAACATGGATATTTGTGACTGAATTCAAAGGTCCAA
AGGGATAATGAGCTCATCAGGCCGACAAAAAACTGTATCTTGACATAAAAGTAAAATAAA
TGTATTTTGTAAGTTTTCTAGAAATTAAATGATTGACAGTGGG
(1783 bp)

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