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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c30156_g1_i3
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		pre-mRNA-processing_factor_39_[Bombyx_mori]
Ontology
GO:0000243 C commitment complex
GO:0000395 P mRNA 5'-splice site recognition
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030627 F pre-mRNA 5'-splice site binding
GO:0071004 C U2-type prespliceosome
Transcript
Level		FPKM:1.65 TPM:1.26
ORF EntryO_BomoASG18260_complete:A_BomoASG_c30156_g1_i3
Sequence
(Nucleotide)
CGTCACATAGATATTGTTTTAATTATACTTACGATAAGGTGTATTGTTTGTATTCTAGTG
CTTAAGTTTAATACAACTTGTACATGCATGATGTATTGTAATACATACTTTATTGTATAT
ATAACTAAGTACATAATGATTTATGGATAATTAAGATGAAACTAATCCATGAAAGCACAC
TAGCGTGGATCACAGCGGTTCTCCATATTTAGCCATTTCGAAGATCACGGCGAAGACAGC
GAGCCCGGCAGCGTCCATTACGAACAGGTGTAATATGCCCGAACAAACATTTTATTTTAA
ATAGATAAAGTGAGATGTTGCGTTACATTGGTGTATTTATTGCTTCGAACAAATAGGCGA
CACGTACCCGACCTCTCGCTTCCTCTATTTTGAAAAATTGAATGAAAAATATTATGATAT
AATGCTATTGAATATTCCCTTGCTATCATAGTATTGTTGTGTCCACGACAATGCTTGGAC
GCTCGTGGAAATTGTTTTCAAATTCAATCTTGATTTTCAGGTTTTGGAAAGGGGACTTAA
AGCTATACCTTTATCCGTAGACCTCTGGATACATTACCTCAATCATATAAAAGCGACTAA
AACCGAAGACCATGCGTACATCAGATCTCAGTATGAACGAGCCATAGATGCATGCGGACT
AGAATTTCGCTCGGATCGTCTTTGGGAGTCTTACATCAAATGGGAAGCGGAAAATGGTTC
CGCTCTCAATGTCACGAATATCTACGATCGTCTTTTGGCAACACCCACCTTAGGGTACAC
GTCACACTTCGACAATTTCCAGGAGCACGTGATGTCGGAGCCGGTGACCGGCGTGGTGAG
CCACGCGGAGCTGGTGCGGCTGCGGGGCGAGGTGCGGGACGCGGCCGGCGCGCAGCCCAG
CCTCGACCTGCCGCCCGGGGAGGACGAGCCCGTCGACCATGTCGCATCCGATGAAGAGGC
GCAAGCCATCAAGGAACGGATTGTTGCAGCTCGAAGAAAAATTCATAAAACGACCGGCGA
AGAAGTAACTGCGAGGTGGACTTTCGAAGAAGGAATCAAGCGGCCTTATTTCCACGTGAA
GCCCCTGGAACGTTGCCAGCTAAAGAACTGGAAGGCGTACCTCGAATGGGAGAAGCACCA
CGGTTCGTTCAAGCGAGCCCTCGTGCTCCACGAGAGATGCCTCATTGCATGTGCCTTATA
TGAAGAATTCTGGATGAAGCTTATAAAGTTTCTGGAAGAACGTGCTGAACAAGATCCTGA
AGTGATAGCAATAGAACGGGAAGTACTAGAGCGAGCCTGCACAGTGCATCACCTCGACAA
GCCAGAGCTCCACCTACACTGGGCACACTTCGAAGAGGTGCAGGGCAATACACTGAAAGC
TGCCGAGATACTTGATCGTATAGAGAAAACCTGTCCCAATCTCGTACAAATACAGTACAG
GCGAGTGAACCTCGAGCGACGACGCGGCGACTACGAGAAGTGCTCTCAGCTATACGAAAC
GTACATCAGCACTTCGAAGAACAAGTCGCTGGCGTCTGCGCTCGCCATCAAGTACGCGCG
GTTCCTGCAGCACGTGCGCCGCCAGCCCGCCGCCGCCCGCGCCGCGCTCGACGACGCCGT
CGCCAAGGACCCGCTCAACCCGCGCCTGCACCTGCAGAGACTTGACCTCGCCATCAACAC
TCCCGGCGTCACCTACGAAGAGTTGGATGAGCTGGCACAGTCGTACTCGAGACAGGAGGG
CGCGGACACGGAGGTGAGCGCGCACATGGCGTGGCGCCGCCGCGAGCTCGCGGAGGAGCT
GGGCAGCGCCGCGCACGCCCGCGCCGCACACGCGCACGCGCGCGCTCTCGCCAAACATCT
CCGCAAGCGCGCCCGCAAAGACAAGCACGACCCGCCGCCGCCGCCAGCAGTAACTGATTC
TAAGAAAAAAGAGAGTACGGCAACCGCCAATTCTGTTCCGACGACGAATGCGAATTACTA
CGCGCCGACGACAAACACGCAGTCCTACGACCAGTCGTACACGCAGTCCTACCAGCCGAC
CTGGGGCTACCAGCAGCCCCCCGGGCCCTACCAACACCACCCCCACGCCTGGCCGCAGTA
TCCCAACTACTATTAGTAATTTGAAGAACATTCGTGATGGACGTACGAATCAGTACATAC
TTTTGATTTCAGTCACCTTTTTCTCCATGTATTAGGTTAGGTTAAGATTACGTTTACAAT
TAACTTTAGAATGTAGCTACAGGCTTTAGATAAGAATTATAGCTACTATATTAGTAATTA
AAATAATTTGTTTGGATAAACGTATGTTCGTGAAACATAATGTAGTTGAGGTCGGATTTT
TTTATAAATTAAAAACATGGATATTTGTGACTGAATTCAAAGGTCCAAAGGGATAATGAG
CTCATCAGGCCGACAAAAAACTGTATCTTGACATAAAAGTAAAATAAATGTATTTTGTAA
GTTTTCTAGAAATTAAATGATTGACAGTGGG
(2491 bp)

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