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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c30156_g1_i1
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		pre-mRNA-processing_factor_39_[Bombyx_mori]
Ontology
GO:0000243 C commitment complex
GO:0000395 P mRNA 5'-splice site recognition
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030627 F pre-mRNA 5'-splice site binding
GO:0071004 C U2-type prespliceosome
Transcript
Level		FPKM:2.97 TPM:2.28
ORF EntryO_BomoASG18255_complete:A_BomoASG_c30156_g1_i1
Sequence
(Nucleotide)
GAGAAGCTAAAAGCTCAAAAAGCGATAAACTAAAGCAAATTGCGTCCAAATACGAAATAA
AACGTAGCGACTAAATACTTTTCCAACTCAAACTACTACTATAGCTGTTTCGCTTAGATT
GTAGTGTTTGATCGATATATCTCGTTCTACCAGATTTCTAAACTTGAAACATGGAAGATG
AAACAAGCTCCGATAATCAGAAAGGATCTGAAAATCCCATGGATACAGACGAAGGTCCTT
TGATAAATGAGAACTCCAACGGACTTTCTCATTTGTTAACAGAGGGCGAATTTAATAGTG
TCGATGCTGCTGTTGATGAGTCGTCGACATCTAATCAATGTTTCTTGAACGCCGTGGAAT
TATCAGCTGGAAGCGCTGGTGACTACCTCGAAAACAACGGCCCTCGCTTCAGTACAGATT
CTTTTGACATTGGTGATAATGCTGTAACTTTTCCCAATGATTCTCTAAATAGCGCATTGA
CTGAAGATAATTCTATTCAAAGTGACTCTGCATCCCACAAAGCAGTTTTAGACACAGACA
GTAGGCAGTCTGAAAGTCAACATGCAACAGATTCCAATGTAGGAGAGATAAATGAAAACT
CTGGCAATGACTCTAACTTCGCCACTGAGCATGTAAATTTAAATGTGGATAAATCAGAGC
AATTGGAAATTGTTGAGCCATGTAGCAGTCCAGTAAAAGATCCAGTGATTAAGCAGGATG
AAGGCAAAGAGTTTAAAAACCAAAGAGAAGTAGATGATATCAAAGAACAATCACAAGACT
CAGCAAGTAAGATTGGTGGTGCTGAAGAAACAGAAGTAGTATCAGAGGATGAACTTCCTG
AAGTGCAAAAGCCGAGCATCAAAGATGCTGAGAATGTATCTGATGATGAGTTGCCGGGGC
CGAAACCTGCAGAACTGCCTGCTGATACAGAGGTTGTATCAGAAGATGAGCTACCTGCAT
CCAAGAAAGAGTCTAGAAAACGAAAACCAGATGAAGAGAGAAGTAATTATGATCCAGGAT
CACCAACATCAGAAGGTGAATCTTCCACAAAAAAACAAGCTATTACCAAGAACGGCGAAA
GCAAGCCCATACCTGCCGAAAAGAGACCTTCAGTTGATGAAAAACCTAAAAAGAAAGTTT
TACCGGAATTGGAAAAGTACTGGAAAGTTGTGAATGATGATCCGACTGACTTCACTGGGT
GGACCTACCTATTACAATATGTCGATCAAGAGAGCGATGTTGAAGCTGCACGTGAAGCCT
ATGACGCCTTTTTATCCCACTATCCTTATTGCTATGGATATTGGAGAAAGTTTGCAGATT
ATGAAAAACGTAAAGGAAGTAAAAAGAAGTGCTTAGAGGTTTTGGAAAGGGGACTTAAAG
CTATACCTTTATCCGTAGACCTCTGGATACATTACCTCAATCATATAAAAGCGACTAAAA
CCGAAGACCATGCGTACATCAGATCTCAGTATGAACGAGCCATAGATGCATGCGGACTAG
AATTTCGCTCGGATCGTCTTTGGGAGTCTTACATCAAATGGGAAGCGGAAAATGGTTCCG
CTCTCAATGTCACGAATATCTACGATCGTCTTTTGGCAACACCCACCTTAGGGTACACGT
CACACTTCGACAATTTCCAGGAGCACGTGATGTCGGAGCCGGTGACCGGCGTGGTGAGCC
ACGCGGAGCTGGTGCGGCTGCGGGGCGAGGTGCGGGACGCGGCCGGCGCGCAGCCCAGCC
TCGACCTGCCGCCCGGGGAGGACGAGCCCGTCGACCATGTCGCATCCGATGAAGAGGCGC
AAGCCATCAAGGAACGGATTGTTGCAGCTCGAAGAAAAATTCATAAAACGACCGGCGAAG
AAGTAACTGCGAGGTGGACTTTCGAAGAAGGAATCAAGCGGCCTTATTTCCACGTGAAGC
CCCTGGAACGTTGCCAGCTAAAGAACTGGAAGGCGTACCTCGAATGGGAGAAGCACCACG
GTTCGTTCAAGCGAGCCCTCGTGCTCCACGAGAGATGCCTCATTGCATGTGCCTTATATG
AAGAATTCTGGATGAAGCTTATAAAGTTTCTGGAAGAACGTGCTGAACAAGATCCTGAAG
TGATAGCAATAGAACGGGAAGTACTAGAGCGAGCCTGCACAGTGCATCACCTCGACAAGC
CAGAGCTCCACCTACACTGGGCACACTTCGAAGAGGTGCAGGGCAATACACTGAAAGCTG
CCGAGATACTTGATCGTATAGAGAAAACCTGTCCCAATCTCGTACAAATACAGTACAGGC
GAGTGAACCTCGAGCGACGACGCGGCGACTACGAGAAGTGCTCTCAGCTATACGAAACGT
ACATCAGCACTTCGAAGAACAAGTCGCTGGCGTCTGCGCTCGCCATCAAGTACGCGCGGT
TCCTGCAGCACGTGCGCCGCCAGCCCGCCGCCGCCCGCGCCGCGCTCGACGACGCCGTCG
CCAAGGACCCGCTCAACCCGCGCCTGCACCTGCAGAGACTTGACCTCGCCATCAACACTC
CCGGCGTCACCTACGAAGAGTTGGATGAGCTGGCACAGTCGTACTCGAGACAGGAGGGCG
CGGACACGGAGGTGAGCGCGCACATGGCGTGGCGCCGCCGCGAGCTCGCGGAGGAGCTGG
GCAGCGCCGCGCACGCCCGCGCCGCACACGCGCACGCGCGCGCTCTCGCCAAACATCTCC
GCAAGCGCGCCCGCAAAGACAAGCACGACCCGCCGCCGCCGCCAGCGTACGTATCTCCAC
TTAACCAATAATACTAAATCAATGGACACAAGCTAATGGCACCACTCACCGACAAGGCGT
CCCCTCCCAGATCGGAAGA
(2839 bp)

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