SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c30136_g1_i1
Scaffold_idBomo_Chr16
NCBI non-redundant
(nr)		unconventional_myosin-XVIIIa_isoform_X1_[Helicoverpa_armigera]
Ontology
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005793 C endoplasmic reticulum-Golgi intermediate compartment
GO:0005794 C Golgi apparatus
GO:0005802 C trans-Golgi network
GO:0005856 C cytoskeleton
GO:0006259 P DNA metabolic process
GO:0007030 P Golgi organization
GO:0016020 C membrane
GO:0016459 C myosin complex
GO:0016477 P cell migration
GO:0016887 F ATP hydrolysis activity
GO:0031032 P actomyosin structure organization
GO:0042641 C actomyosin
GO:0043066 P negative regulation of apoptotic process
GO:0043531 F ADP binding
GO:0044822 F RNA binding
GO:0048194 P Golgi vesicle budding
GO:0050714 P positive regulation of protein secretion
GO:0051015 F actin filament binding
GO:0090161 P Golgi ribbon formation
GO:0090164 P asymmetric Golgi ribbon formation
Transcript
Level		FPKM:86.20 TPM:66.12
ORF EntryO_BomoASG18210_complete:A_BomoASG_c30136_g1_i1
Sequence
(Nucleotide)
AAAACGCTCTGTGACATTTCGAAGACTTGATCAATTTAATTTTTATCTCTGAAAATGCCA
AACACAACGTTCGTTCTATATACCAACGTCAAAGAATAGACGAAGAATGTTTCACGTTCA
AGGCTCATTCGAACAGTCGTTACGATGCGGCGACGAAGTATCGCCAAATGGGAACAAGAC
CTTGGCCGCGCTGGCCAAAATCCACAAACACTGTATAGGTAAAGCCCATGCCAATGGGTG
TGTAGATCATAAACACAATCCACTCGCAAAGTCTGACTCGAATACTAGTTTGCAATCTAA
AAAGTCCTTTCGTGGAGATTGCATCATTGAAATCAAAGAAGCAGATCGAAATCAACAAGA
TTTAAGTAAACCCAACGATGGAGGATTCACAAAGAGCTTTAGCAACAGTACAAGCTCGTA
TGAAGGACACAGTGATACTGATTCGGAGAATTTTAAATCAAAAGTAGATCCCAATAAGGC
AATGGATCCATGCGAACGTCTTTTCGCACAAAATACTAAAACATCCCTGATGAAAACGGC
TCGGATGCGGTATGCTGATGATCCTGTTGTACAGGATGAAGTCGATGGTGACAAAACTAA
ACAAACCTTTGTGAGAACACCATCAAGATCCAGCTATAGAGAACGAAAATCAGGCGTCGT
TACTATAGAACAGGTCAAGTCAGATTGTGCCAATCATGACGAAGAACTCGGCAATTCAAT
GTTGTTCGATGATAAGAAGAAGACTCCTACACAAAATAAGTCAATGTTACAACGCAAGGG
CTCTACTGGAAGTAGTGCATCAAATGGAAAAGCCAATGGAGTAAAACCACCTTGGAAAGG
AGCAAGTAAGAACGGTATACCGCCCGAGTCTTTTATCCGTACACCATCGCTTCGAGGAAG
TATCCGAAAGAAAACCACAAAAAACGATGGAGTACCGTGGCGTAAACTGTACGAACTTTC
GCTTTGGAGGAGGTGTGGCGTGAGTTTCGCTACGGTTGGCGCCGATACTGAACGCGCGTT
ATTGCGGCCATGGAGCGAACTGTCTTCACAGCACCATCCGCCGCCCGTACTCGAGGCAAA
ATCGGAGGAGCAGTTAGCATGCGAAAAGGAGTGGCTCCAAGCCGGTCACATGTGGCTGGC
GCATCGCGGTGGCTTCACTGCCGTAGTGAGAGAGGGTGACGCAGAAGCTGGTCGCACTAA
AGTACGCGTACTACAAACCGGGGAGGTCCTGACTGTTGATGAAGATGACCTAGAGAAGGC
GAATCCGATTCAGCTGGAGCGCTGTGAAGACATTGCCTCCCTGCGTTGTTTGAATGAATG
TGGCGCTCTCAATGTATTGAGATCTCGATATGCCGCCGGACTGACGCACTCCCGCGCCGG
TCACGCTCTCCTGGTAATGGGTCCACCTAAACGGACTGCCCCGATTTACACGGAGAAGGT
GGCGGCTATGTTCCGCGGCTGTCGCGCCGATGACATGCCGCCCCACGTGTTCGCCGCAGC
TCAATCTGCGCACCGCTGTATGCTCGCATCTAGACGAGATCGAGCTATAGTCTTCCTCGG
CAGGTCTGGTTCGGGTAAGACATCGGCAATGCGGCACTGCGTTTGGTACCTGGCAAGTGC
CTACCCAACTCAAGGCTCGAAATTGACTCCTGAGCGACTGGACGCAGCTTTCGATGTTCT
ACACATGTTTGGATCCAGTCGCACTGGATCTAATCCTCATGCGTCGCGTTTCGTGTCTCT
GACGTCGCTCGACTTCGACGGCGGCGGCGCTCTCGTCTCCGCCTCAGTGCAGACGTTACT
ACCTGACTTCAAACCTGGTCAGACAACGCTTCGAGCACTCCATACGCTCTTCCACGGCTG
CGACGGTCGCCTCCGTCGCGAACTCCTGTTCGAGCAGGCTCCGGTGACGGCGCCCAACCC
CTTCCTCAGCTCTCAAGAGAAGGCCGACGCTCCCGCCGAATTCTCAGCGCTAAAGGAGGC
TCTGCAGAAACTGGGCGTTACGGAATCCGAGCAGATGGCCATTTGGAAGATCATGGCTGC
TATATGTCATTTAGGATGGGCTGGTGCCGTCAAAGCCAACTCTGGATCAGCCGTCAAATT
TCAATTCGCCAGCACGGGGTGCGGTCAGCGCGCTGCCAAGATGCTGGGCGTCACTCCCGA
GGAGTTGATGCGATCTGTCTTCGCAACTGTTCCCACTTCCCCACAGTCTAATTCCAACTT
GAGAACTCCGTCGCCTTCGAACGAAAAAGAGATCTCGGCGACTGAAGCGCTGGACGGGTT
CGTGAACGGTCTCTACAACGAAACCTTCAACATCGTCGCTGCACTCGTCAACAGGAGCTT
ATCCACGTCGGCGAGGACATCAGCTTCGATATTATTGCTGGACACTCCCGGAGCTGACAA
CCCTATGTGCGCCGGACAACAGAGCGGGGCAGGGCTGTCCAAACTACTGTCTAACTATTT
ACAAGAACGTCTCCAAGCTGTGTTCCACGAGGCCATGCTGGTGGCGCCGCGGGACCGGTA
CGCGCAGGAGGGGATCGCGCTCGACGACGGAGCTGATGAAGATTGGCTGTCGGAAGCGGT
GAGCCCGGGACCGATGGTGGAACTGCTGGATAAGGCTCCGCAGAACTCGATCGTGCGGAG
CTCACAGACCGACCTGCGGGAATGCGACCGACGCGGACTACTATGGCTACTAGACGAAGA
GTCCATGTATCCCGGCTCGTCCGACGACACGTTCCTAGAGCGAGTGATGACGCACTACGG
TCCGCCGAATCAGATGCAGTACCTCATCAAGAAGGCCCCGCATGCCAGACAGTTTATATT
GCAGCATTTACAGGGAACTAACCCGGTGCTATACGACGTCACCGGCTGGGTGAAGGCGAG
CCGCGAGAACCCAGTCACGAAGAAGTCTCTCACATTACTACAGGAGAGCCAGAACGAGGA
AGTGTCACGGCTGTCGTCGTGGGCTCGCGGCGCATGCGGCGTGAGCGCGTGGTCGGCCGC
AGTGGGGGACGCCACTACTCTACGGCGGGCTTCTTCTATCCGACGAACCCTTACTTCGGG
TACGGCCGGCATGAAGCGTCGCTCGACCGCCCTGCAAGCGAAGTTCGTTGCGGACGGCGT
GGTGGACACGCTGCGGCGGTGCGGCACGAGCGGCGTCATGTTCGTGTGCTGTCTGCTCGC
GAACCGACCGACCGACTCGCCCGATGACGTCAACGTGCCGCTCCTACGATCGCAGTTCCG
CGGATTCCAACTGCTGGACGCGTCGAGGCTTTACAAGCAAGGTTTCCCCGAGCACATGCC
GCTGTCGGAATTCGCCAGAAGATATCGTCTTCTAGCGACATCCGAGAGTGAAGACTCCGA
AACGAATCAGCAGCAGACCCTCTCGGACAGGCAGGTCGTCGACGACATGCTCCTGGCCTT
GGACTTGGACGTCACCAGCTACAGGCTCGGGCTCACTCAGATTATGTTCAGGGGCGGCGT
CGTCGGCGGCTTGGACGCGCGTCGAGACGCCGCGCTTGCCCGCGTGCTCGTTCGCCTGCA
GGCGAGGGCGCGCGGGTTGCTCGCCCGACGCAAGGCCCAGCGTTTGCGGACGCAGCACAC
GGCCGCACGGTGCATCCAACGCAACGTGCGGGCCTTCCTCACGGTGCGGGACTGGCCTTG
GTGGAGGCTGCTCGTGCGAGTCACGCCCCTGCTCGCCGTGCACAGGACTGAACATCGACT
TAAACAAGCACAGGACGAGTTGGAGACGCTTCGTTCTAAATTGGACAAAGTCGAAAACGA
AAGGACACATTACAAGAGCGAAACCGAACGACTCGAGACTAAGCTCTCGGAAGTGGGAGG
TGAGCTAGCAGAGGAAAGAGCGGCCGCCGGACTCGCAACGGAACGAGCGGACGCCGAGGC
TGCAGAACGCCTTCGAGTGGAGAAGGAGAACAGAGACTTGGTCGCCAATAACCAGCGATT
ACAGCAGGCTTCAGAACGTCTAGAACTTGAACTCTTGCATTGGCGTTCGGCCGATAACGG
AGCAGCGGAACATTCAGATTCGGAGGGATCCGAAGCGGACGCGGCCTCCGCCGGCGACAA
GTACAAACGGCGATACGAACGCGCCCACCGAGAGCTGCAGCTGATCAGGGCGCAATTGAG
ACGCCAACACGAGGACGACCTCGAACAACTCGTTACGGTCAAGAAGCAGTTGGAGAAGAA
GGTTCAAGATGCATACGAAGAGGTCGAAGAACAGCGAGCCGTGGCCGCGCAATGGAAACG
AAAATTGCAGAAACTCACCAACGACATGGCCGACCTGAGGTCGCTTCTCGACGAACAGAC
GTGCCGCAACAACTTGCTGGAGAAACGCCAGCGTAAGTTCGACGGTGAGCTACAGGCGGC
GCAGGAAGAACTGAAGAGAGAACGATCGGCCAAGGAGCGGATCTCTCGCGAGAGAGATCT
AGCGCAGGCGGAGAAGTTCGCAATGGAGCAGTCCCTTTCTGAAGCTCGTATGGAGTTGGA
GCTGAAAGAAGAGCGGCTGTCGGCGGCGGCGCGCGAGCTGGAGGAGCGGGGCGGCGGCGG
CGACGAGCTGGCGGCGCTGCGCCGCGCCCGCGCCGACCTCGAGCGCCGCGTGCGCGACCA
GGACGAGGAGCTCGACGACCTCGCCGGACAGATACAGTTGCTCGAAAGTTCGAAACTTCG
CCTGGAAATGTTACTGGAGCAGCAGCGCAAGGAAGCACGCCTGGAAGCCGCCGCCCGCGA
CGACGAAATGGAGGAGACCAGAGCCAACGCTGTCAAGAAACTGAAGATACTGGAGAGTCA
GCTGGAGAGCGAGCACGCCGAGCGCAGCCTGCTGCTCCGCGAGCGCCACGAGCTGGAGCG
GCGCCTGGCCGCGCTCGAGGAGGCCGCGCGCGCCGACACGCACGAGCACGCGCAGCTCGC
GCAGAGACTCAAGCGGGATTTGAAGAGGTACCGCGCCCTGCTGCGCGACGCACAGACCAT
GCTCGAGCAGAAGGAGAAAGAGGGCGGCGCTAAAACGCAGATCAGACAACTGAAGAACCA
GGTCGAGGATCTAGAGCTGGCGGTCCGCGCTGCGATGAAGGCCCGTCAGTCGGCGGAGGC
GGAAGCGGCGGAGGCCACCGCGGCGCTGGAGGAGGCCACGCGCGCCCGCACCGACGCCGC
GGACCGCGCGCTCGCCGCCGCACGGGACGCCGCCGCCGCGCGCGCACAGCTCGAGGACGC
GGAGGAAGAGGCCGCCGAGGTACAACAAACGTAGCTTCGTCTAGATTAGTCGCAGGGTAG
GTCCAATGGTAATCCAC
(5297 bp)

- SilkBase 1999-2023 -