SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c29983_g1_i1
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		bromodomain_adjacent_to_zinc_finger_domain_protein_1A_[Bombyx_mori]
Ontology
GO:0000124 C SAGA complex
GO:0000775 C chromosome, centromeric region
GO:0003713 F transcription coactivator activity
GO:0004402 F histone acetyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005671 C obsolete Ada2/Gcn5/Ada3 transcription activator complex
GO:0005829 C cytosol
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008080 F N-acetyltransferase activity
GO:0010484 F H3 histone acetyltransferase activity
GO:0016568 P chromatin organization
GO:0016573 P histone acetylation
GO:0016740 F transferase activity
GO:0016746 F acyltransferase activity
GO:0032968 P positive regulation of transcription elongation from RNA polymerase II promoter
GO:0043966 P histone H3 acetylation
GO:0046695 C SLIK (SAGA-like) complex
GO:0070577 F lysine-acetylated histone binding
Transcript
Level		FPKM:4.47 TPM:3.43
ORF EntryO_BomoASG17819_5prime_partial:A_BomoASG_c29983_g1_i1
Sequence
(Nucleotide)
TTCCGATCTGCAGAGTGCGCCGAGCCGCGCCCCCCGCCCGGCGCCGCGCGCTGGCTCTGC
GCCGCCTGCCTCGCGCCCACCAGAGCGATGTCGAGCGTCCGGCGCTGTGCTGCCACCGCG
TTGTCCAACATCCACCAGTACACGAGGGCGCTGCACGCGAGCCCCTCCTCCGAGTCAGAA
GACAGCGATTACAACACGACTCTGGTTAAACTGAAAAAGAGGAAACAGCGCCACAGCAAC
GACGCGGTGCCCCTGCAGAACGGGACCACCCCTCCTTCGGGGAAGAAACGCGGCAGGAAA
CCAAAACACGAGAAACTGAACATGAGCAACGGGAAAGATAGGAGATCGAAAAATTCCCTC
ACAAACGGAGTTCATGAGGAGCGTGCGGCGCGCGGGCCTGACGCCGTGCAGCAGCTGCTG
CGTGACGTCATCAAGCACAAGGACAGCTGGCCCTTCTACGAGCCCGTCTCCATTGAGGAT
GTACCTGATTATCTTGACGTAATCGATCAGCCCATGGACCTCACCACGATCAAAGAGAAG
CTGGAGAAGTCCCAATACAGCTCGGACGAGGAGCTGATAGCTGATATAGCGCTAATATTC
CATAATTGCTACACTTACAATACTGATACACATCCCGTTGCCAAGGCCGGTGGTCGCCTC
GAGAAATTCGTGAACAAGCGCTGCGCCGAACTCGACTTGCCCTCGCTGCCCGAGCTCAGC
TTCAGCAAGAGGAAGGAAGCCGAGTCTCAGGAACACTCTGCGGGCCCCTCCTCCGATGAC
GAGGACGACCTGCCCATAGCCAAGAGAAAGAAGCACAAGTAACACGAACAGAAGAGCTAT
ATAAGTGTGTGTGATGTGATCGTGTAAAGTTGTAATATTGCATTGTGATTAAAGACAAAC
TGAAATCTGCTCGACGCGTCGGAAGTGTAGTGCTGAACTGTGGACGCGTTCTGAAAGCGA
CGCAATAGCGACCGGAGCGACGGGTCGCGTCTCTATTGCGTCACCGTCGCTAGACTTCAT
TCGCTATTTTGTTTAGTTCGACTTGTAATCGAGTCGAGTAATGCGGCTGGTGATTTTATT
GTATGTCATTGTAAATACGGTATTAGGTTAACGTTTGTGGGAGGGTCCGTAAATGCTTAC
GTACGACTAGCTTACTGCTCGGCGCAAGTTCAATAGTTTTGTTCCTGTCAAGCTCGAAGC
AGCTTGTGATTGTCCGTTTGAGTTTCACAATTTTGATCAACATTCGTTTGGTAATATAAT
ATAATTGCATTTATGACTAAAAAACAGTAAGTCAAGCTATTTTACCTATTTTTATGGGTT
TTATGATCAAATTACAATCGGTTTAATTCCCATTATTAATAGTTCCTGACCCGTCATTCC
TTTAACCAAAGTTTTGGGCTCACCGGTTTGTTGTGACATGCCAGTGCCAGTGTCCCGGAC
AGTTCCTGATCTGTGCAAACACAGCACCAGTCAACGGTGTTCATAAATAATAGAATCTTG
TATATTTGTTTGTCAAGGAGCTTGCACGCTTCGCAGATTTCATGCACGTATTTTTATTGA
GTCTTAATTATCTTATTTATCCATACTAGATTAGAACGAAAATATAAACATTTGTAACTT
ATTGACGATATTTTTGATGTGAATGTTTTAAATTTTGTTCTGTTCTCGTGTAAGTTTGGA
AAGTATACATAATATTATTTATTAGTCACTCGTAGTAATAATATAAGTTATGTTATGTAA
AATTCTTGTGAGAAAGTGTAGGGACGTCAGAAGTTCAACCATTAATAAGTTCATCATTCG
AGGCAAGCCATCTCAAAATACTCAGTATTGTGGCTTTCTTATTGCAGCTGTAGACAGATA
GTAGGCGAACCACGCGACTGTAAGTGGGCACGCGGC
(1896 bp)

- SilkBase 1999-2023 -