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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c29969_g1_i2
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		LOW_QUALITY_PROTEIN:_neuroblastoma-amplified_sequence_[Bombyx_mori]
Ontology
GO:0000149 F SNARE binding
GO:0000956 P nuclear-transcribed mRNA catabolic process
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0070939 C Dsl1/NZR complex
GO:2000623 P negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
Transcript
Level		FPKM:2.74 TPM:2.10
ORF EntryO_BomoASG17749_complete:A_BomoASG_c29969_g1_i2
Sequence
(Nucleotide)
GTGCTCTTCCGATCTCTGGGAAGTTCTAATAGTGACATATGACGGTAAACTGCGTGGATA
TTTGGTATCGCAGACAGAAGGGTTCAAAATTCATCATACATTTAAATTCAGTGGAGGTGT
GTCCGCTGTAGCATATAGTGATCGACATTCCACTCTTTACGTTGCTGGAGTACCTAGAGG
TTCAGGAAAGGATCCGTCATCGCCTCTAAGCGCAGGACTCACAGCCTGGCGGATACTAAA
TGACGATCCATTCTATAAACTGTCTGTTGTGTCGGACGAGCTCGAGGCGCAGTTGGCAAA
TCAAAGATTCCAGCTTTACATTCCATTTGTAACTTCTAAGAATTTAGCATTCATAGTCCA
AATGCAGCTGTCGCCCGACGCGACTAGACTCGTATGTCTGCACTGCAACGGAGACGTCTC
GGTGTGGCGCCTCCCGCTGCTGAAAGCGGAACATCGGTGGCCCTTGGACACTCAACCGCT
GCACGACCTAAGGAATCCGCTGAGCAATGATGATAAACCAACCAAGAAGGACCCGATCAA
ATATTACGTGGCTGATGTTAACTGGTGGAGTGGCGAGGAAATAATAGTGTCCAGATTCAG
CGGCGCCGTGTCTGTGTGTCCCATCCAGGACATGATGAACATTCTCGGGAAGAAACCCGA
GTTCTTCCAGGGCGCACCACGGATCACGTGTGCTCACGAGGGAACATTCATGGTGCTGGA
ATGCGAGTCTAATGTGTTGCCAGCGAAGAAATCACGAAGTGACGAAAGTATGGAAGTAGT
GTCGACGGATAACGACGAAGAGGATACGATGTTTGAATTAACCAAAGAGCTGTTGAAGTC
TGTGCTGTTCGCGATCACCGATATCGAGACCTTCCAGCCCAAGCCGAAGCGGATAACGGT
CGTCTCCCGGGTGTACCGGCTGCTCGGAGTCAAGAGCACCACGCCCGCCGAACTATTCTC
CAGGAAGATTGAAAGCGGCAAGTACACGGAAGCCTTGGCTTTGGCTGAAGAGTTTGGGCT
GGACAGCGACTTGGTGTATCAGCAGCAGTGGAGGAAGAACCCTGTCTCTACAGAGGCCAT
ACAGAAGTACTTGAGCAAAGTGTCTAAGAAGATCTGGGCGGTGCATCAGTGCGTGGACCG
ACTCCCCGAGACGCTACCGGCCGCCAAAGAACTACTGCAATTCGGGATTCAACTTACCAA
TGAGAGAATACTTGATGAAATAAATACGAACTCTGAGAACAAGATAGAAGATCCTGACAA
CATAACCCTGGAGCATCTCAACGCGTACACGAGCGAGCTGCTGCGCTGCAGGCACGTCAT
GCTCTTCTACAGAGATCGACTGGCGTTATATGAGGCGATTCTACGCTGTGAGAAATCAAC
GTACGTGAAAGACGAGTACGACCGGCTCCGCAGCAACAGCATCGTGCACAGCGCCGCCGA
GACCGCCAAGGAAGGCCGCGTCGAGGCGCTCACCTGTCTGTGGCCTCAAATCAAAACGGT
CCCCATGCAGCTGGCCGTTCTCGAGAAACTACCAGAGACAATCAACCCCATAGACTATCA
ACATTTGTTACCCACCAAGCAGGTCGTGCAGTGGTTCGAGAAGAAGTCCCCAATTAAACT
GCCGCCGTCACAGTATGACAACGACTGGTGCCGCAAAGGCATCTTCAGGTCGATATGGAG
TTCCAACTGGTCGGAAGACTGCACTCCCGATGTCGAGACCGTCGCGGATGTCTTAATAGA
AGACGAAGAGTTAGGGAAATGGTACGAAAAGAGAGCGAGGGAGATCGAAGAGAGAAGCGG
CATGGTTTCTCATTCTCTTACTCTTGTGACTATTGCGATGGTCGGCGGCGGCGTTCAAGG
CTTAGACAAAATTATGTTTCACCTCATGACCCTGGACACTCTGGTCTACGATATAAACAT
CGAAGGGGTAACGCTCAAGCAGCTCGAAGGTCTGCCGCCGCTGGAAATTTGCACGCTGCT
CATGAAAACGTCGACGGCAGAAACGTTCGTGTCGGACTTGAAGCAGTACGTGATCCCGTA
CCTGAAGCGCCTGGAGAACAGGTCCAAGGTCAACGACGTCTGCATCAACGGCCTCATCGA
TTATCTGGTGCATATAAGCATTGAAGACTTGTCTCCTATACTCCTGGTGTTGCAGTCACC
GACGGAGTTCGCGCTAGATGTCTGCACTCATTTGGATCTAGTCGAAAAATGTTTCTTCGC
CTACACCGGCACCGACCTGGAGAAAGCGAACGCCCTGCTCGACACTATACCGACAGAGAG
CGACGGCAGCATGTCGACGGCGGCGCTGCAGAGCGCGGC
(2319 bp)

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