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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c29969_g1_i1
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		LOW_QUALITY_PROTEIN:_neuroblastoma-amplified_sequence_[Bombyx_mori]
Ontology
GO:0000149 F SNARE binding
GO:0000956 P nuclear-transcribed mRNA catabolic process
GO:0005737 C cytoplasm
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005829 C cytosol
GO:0006810 P transport
GO:0006890 P retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum
GO:0015031 P protein transport
GO:0016020 C membrane
GO:0070939 C Dsl1/NZR complex
GO:2000623 P negative regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
Transcript
Level		FPKM:4.36 TPM:3.34
ORF EntryO_BomoASG17747_complete:A_BomoASG_c29969_g1_i1
Sequence
(Nucleotide)
GTCAAAATATCGGTCGATATTAGTTTTTCTGAATTAATCGGGACTTGAAATTATTTTCTT
AAATTAACTAAAATAAATGAAGTTATTTAGGGTAAACAGAACTTAAGGGCTTAAACAAAA
AAAATCGGCCTGATCATGTCGGAAGAGAATAAATCAATTCTCCACGAACTATACGTATAT
TCGGAATGGAAACCTGAACCAGAATATATTCAAAAACCTGATAACTTACTACTACCAGAA
AACATATCATCTTTATGGAAGTGGCTTAAATTTTTTGGACCCAAGAAGAATTTAATAGAC
AGTGTAACTGCTCATAAAGAAAACCACCAAAAGTGGCATATCGCTCTCGGAGATGAAGGG
AAAGTCATTGCTGTGTTAACTGACAATATATTGGAGATTAGAACAAAGAGATCTGACTAT
GCTACTATTGCTGCTAGAACTACAGTTAATAGGGATCCTTATTCACAATGGAGGAAACTC
GTCTGGAGTCCTGATTGCTCCTTTGTGGTTCTAGCATATGGGAATGGCGTAGTTGGCTTC
TTTGACTTGACTGCTTCAAACCTTTTCAATATTCCTATTGAATGTTCAAGACCAGAGGGC
TTGGAGTGTTCAGACAACACTCATGCAGTCGCCGACGTTATATTCATGCCACTTAGGGTC
AAAGACACAAAATGGAACTGGGAAGTTCTAATAGTGACATATGACGGTAAACTGCGTGGA
TATTTGGTATCGCAGACAGAAGGGTTCAAAATTCATCATACATTTAAATTCAGTGGAGGT
GTGTCCGCTGTAGCATATAGTGATCGACATTCCACTCTTTACGTTGCTGGAGTACCTAGA
GGTTCAGGAAAGGATCCGTCATCGCCTCTAAGCGCAGGACTCACAGCCTGGCGGATACTA
AATGACGATCCATTCTATAAACTGTCTGTTGTGTCGGACGAGCTCGAGGCGCAGTTGGCA
AATCAAAGATTCCAGCTTTACATTCCATTTGTAACTTCTAAGAATTTAGCATTCATAGTC
CAAATGCAGCTGTCGCCCGACGCGACTAGACTCGTATGTCTGCACTGCAACGGAGACGTC
TCGGTGTGGCGCCTCCCGCTGCTGAAAGCGGAACATCGGTGGCCCTTGGACACTCAACCG
CTGCACGACCTAAGGAATCCGCTGAGCAATGATGATAAACCAACCAAGAAGGACCCGATC
AAATATTACGTGGCTGATGTTAACTGGTGGAGTGGCGAGGAAATAATAGTGTCCAGATTC
AGCGGCGCCGTGTCTGTGTGTCCCATCCAGGACATGATGAACATTCTCGGGAAGAAACCC
GAGTTCTTCCAGGGCGCACCACGGATCACGTGTGCTCACGAGGGAACATTCATGGTGCTG
GAATGCGAGTCTAATGTGTTGCCAGCGAAGAAATCACGAAGTGACGAAAGTATGGAAGTA
GTGTCGACGGATAACGACGAAGAGGATACGATGTTTGAATTAACCAAAGAGCTGTTGAAG
TCTGTGCTGTTCGCGATCACCGATATCGAGACCTTCCAGCCCAAGCCGAAGCGGATAACG
GTCGTCTCCCGGGTGTACCGGCTGCTCGGAGTCAAGAGCACCACGCCCGCCGAACTATTC
TCCAGGAAGATTGAAAGCGGCAAGTACACGGAAGCCTTGGCTTTGGCTGAAGAGTTTGGG
CTGGACAGCGACTTGGTGTATCAGCAGCAGTGGAGGAAGAACCCTGTCTCTACAGAGGCC
ATACAGAAGTACTTGAGCAAAGTGTCTAAGAAGATCTGGGCGGTGCATCAGTGCGTGGAC
CGACTCCCCGAGACGCTACCGGCCGCCAAAGAACTACTGCAATTCGGGATTCAACTTACC
AATGAGAGAATACTTGATGAAATAAATACGAACTCTGAGAACAAGATAGAAGATCCTGAC
AACATAACCCTGGAGCATCTCAACGCGTACACGAGCGAGCTGCTGCGCTGCAGGCACGTC
ATGCTCTTCTACAGAGATCGACTGGCGTTATATGAGGCGATTCTACGCTGTGAGAAATCA
ACGTACGTGAAAGACGAGTACGACCGGCTCCGCAGCAACAGCATCGTGCACAGCGCCGCC
GAGACCGCCAAGGAAGGCCGCGTCGAGGCGCTCACCTGTCTGTGGCCTCAAATCAAAACG
GTCCCCATGCAGCTGGCCGTTCTCGAGAAACTACCAGAGACAATCAACCCCATAGACTAT
CAACATTTGTTACCCACCAAGCAGGTCGTGCAGTGGTTCGAGAAGAAGTCCCCAATTAAA
CTGCCGCCGTCACAGTATGACAACGACTGGTGCCGCAAAGGCATCTTCAGGTCGATATGG
AGTTCCAACTGGTCGGAAGACTGCACTCCCGATGTCGAGACCGTCGCGGATGTCTTAATA
GAAGACGAAGAGTTAGGGAAATGGTACGAAAAGAGAGCGAGGGAGATCGAAGAGAGAAGC
GGCATGGTTTCTCATTCTCTTACTCTTGTGACTATTGCGATGGTCGGCGGCGGCGTTCAA
GGCTTAGACAAAATTATGTTTCACCTCATGACCCTGGACACTCTGGTCTACGATATAAAC
ATCGAAGGGGTAACGCTCAAGCAGCTCGAAGGTCTGCCGCCGCTGGAAATTTGCACGCTG
CTCATGAAAACGTCGACGGCAGAAACGTTCGTGTCGGACTTGAAGCAGTACGTGATCCCG
TACCTGAAGCGCCTGGAGAACAGGTCCAAGGTCAACGACGTCTGCATCAACGGCCTCATC
GATTATCTGGTGCATATAAGCATTGAAGACTTGTCTCCTATACTCCTGGTGTTGCAGTCA
CCGACGGAGTTCGCGCTAGATGTCTGCACTCATTTGGATCTAGTCGAAAAATGTTTCTTC
GCCTACACCGGCACCGACCTGGAGAAAGCGAACGCCCTGCTCGACACTATACCGACAGAG
AGCGACGGCAGCATGTCGACGGCGGCGCTGCAGAGCGCGGC
(2981 bp)

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