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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c29922_g1_i1
Scaffold_idBomo_Chr14
NCBI non-redundant
(nr)		histone_deacetylase_11_isoform_X1_[Bombyx_mori]
Ontology
GO:0000118 C histone deacetylase complex
GO:0004407 F histone deacetylase activity
GO:0005634 C nucleus
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008134 F transcription factor binding
GO:0014003 P oligodendrocyte development
GO:0016568 P chromatin organization
GO:0016575 P histone deacetylation
GO:0016787 F hydrolase activity
GO:0032041 F NAD-dependent histone deacetylase activity (H3-K14 specific)
GO:0070062 C extracellular exosome
GO:0070932 P histone H3 deacetylation
Transcript
Level		FPKM:4.73 TPM:3.62
ORF EntryO_BomoASG17601_complete:A_BomoASG_c29922_g1_i1
Sequence
(Nucleotide)
AGTGAACATAAGTCTATAGTAAATTAAAAATTTTCATCAATCAATAAAATCAAATTAGAG
AAAATGACAAGTCTGTACTTCGATATAAGCCAAGAGCAATGGCCAATAGTATATGATGAC
AAATACAATGTTTCGGTTTTTGGTCTCGAGAAGTTTCATGTATTTGACGCTAAAAAGTGG
CGGAATATTGTTCAGTATTTAAGGAATGCACAACTTATAACGGATGAACGCCTAGTGAAG
CCAAAAGAAGCCCAGAAGAGTGATTTGCTTGTTGTCCATACAAAGCGGTATCTCAAATCT
TTGAATTGGAGCGCAAGAGTGGCTATAATCGCAGAAGTACCACTTGTATCTTTATTACCA
AATTTCCTGGTTCAATACGCTTATTTAAAGCCGATGAGGTTACAAACAGGTGGTTCAGTT
CTTTGTGGTAAGCTGGCATTGGAGCGTGGGTGGGCTATCAATGTGGGTGGTGGCTTCCAC
CACTGCAGTGCTCAAAAAGGCGAAGGTTTCTGTCCGTATGCTGACATAACGCTGCTGATA
CGGTTCCTCATGATGAATAACTTAATAGAGACTGCTATGATTGTCGATTTGGATGCTCAT
CAGGGAAATGGTTACGAAAAGGATTTCCTGGGTGTTCCCGAAGTATACATAATGGATATG
TACAATAGAAATATTTTCCCGAAAGACAAAGAAGCGAAGAAGGCGATACGAAGGAAAGTG
GAACTCGGGAATCTGGTTGAGGACATGGAATATATGCTGAAATTGCGATTGAATTTAAAA
GCAGCCTTTAATGAATTCAAACCGGATATAGTTGTGTACAACGCGGGCACTGATATTTTG
GACACAGATCCTTTGGGACACATGAGCATAAGTGAATGTGGGATAATAAAACGGGACGAA
TACGTATTCGAGATGTGTAAAGGTCTCCGCGTGCCCATAGTCATGCTGACCAGCGGCGGC
TATCTGAGGAGGACCGCGCGGATCATAGCCGAGTCGATCATTAACTTGCACGGCAAAGGT
CTAATATACGGAAGCTGTAAAGACAGTAAATGGTAAATGAAATGTTGAATGGCGTTATCG
GAACGTGAGGGTACAGAGAGCTGTTAAGACTTGTGTAGTAGTGAAATTGTTATAGAATAT
TATTATTTTCCTACCTAAGCTGATAGCCT
(1169 bp)

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