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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c29909_g1_i1
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		HIV_Tat-specific_factor_1_homolog_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0000398 P mRNA splicing, via spliceosome
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005684 C U2-type spliceosomal complex
GO:0005686 C U2 snRNP
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0019079 P viral genome replication
GO:0032784 P regulation of DNA-templated transcription, elongation
GO:0044822 F RNA binding
Transcript
Level		FPKM:9.69 TPM:7.43
ORF EntryO_BomoASG17569_3prime_partial:A_BomoASG_c29909_g1_i1
Sequence
(Nucleotide)
CTGCGATAACCTTTACGTTTACGTTTACCAGCACTATTTTGTAGATGCCAATTTGAAATC
GGATGAAATGTGGATGAAATTAAAGATTTGACGTATGTTTATCTCTGTAGAAATCAAGTT
TTGTACCTGCAATACAGATAGCCATAATCATATGGTCATCATCAGGTGTTGAATATCATG
TAATATTTCCAAACACTTAACTGTACACATTCTACATCTAAAGTTGTAACGTTCTAACGT
AATAAATGCAAGAATGGCTAAACTAAATCCAAGAACGGGATTTGTGATCAAACTTTCCGA
AGAGACAGTTCAAAAGTTAGCGGAAGAGGAAAAAGAAACAAAAGAAAAATCTACATATAA
TCAGATAGAGGATACTACATCGGTAGAAGATATTAATAATGACAAAATTCAAAATGTTCA
AGATGTGAAAACAACATCACAAACTTTAGATGTACCTACTTCCGATTCCATAGAAAAATC
TACTGTAGAAAGTACTCTGCAGAAAGAAAATTCATCACAAACTGAAAAAACAGTTCTGAA
CATAACTGATGATAAGGGTGAAAATGATAAGGATAATACACTTGAAGATAATGAAAAAAC
AAAGAAACCCTCCAAATCTATTACTGATTCTAGTACTTGGGGTGAGTATGCATCATACAT
AACTTACAAAGATAATGAAGCTGTATATACTGACCCCTCATCAGGTCAAGCTTACACTTG
GAATAAAACCAGCAATGCTTGGGATGCTAAAGGTGATGAAGCACCTGGTCGTGTTTACAG
CTATGAAGATGACACTCATATATACACAGAGGCTGATGGTTCAAAATATTTTTGGGATGA
AACCAAGAAGGCTTGGATACCAAAAGTTGATGATGACTTTTTAGCTTATTATCAAATGTC
TTATGGATTTATTGAAAATAAGAAAGATGATGATGAGAAAGAGAAAGGTAGTGACAAGAA
GAAGGAGTTGCAAAAAGAAGCTATGGCTGTCAAAAGGAAAAGTGAACCGCAGTGGTTTGA
ACCTACTGATGATAAAAACACCAAAGTTTATGTATCAAACTTACCTCTAGACATGACTGA
ACAAGAATTTGTGGACTTAATGCAGAAGTGTGGTCTCGTTGAACGAGATCCAAGTAACCA
AAAAATGAAAGTTAAATTATACATGGACAAAGAACAAAATTGTTTCAAGGGTGATGCATT
ATGTACTTATATAAAAATAGAATCCGTAGATTTAGCATTAAAATTGTTGGATGGCAGCGA
TTGTAAAGGCAATACCATTAAAGTGGAAAGAGCTCAATTTCAACTAAAAGGGGAATACAA
TCCTGCCCTCAAACCTAAGAAAAGAAGAAAAAAAGAGCTGGAAAAAATTAAAAAAATGAA
AGAAAAACTATTTGATTGGAGGCCAGAGATCGGAAGAGCGTC
(1422 bp)

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