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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c29847_g1_i3
Scaffold_idBomo_Chr9
NCBI non-redundant
(nr)		U3_small_nucleolar_RNA-associated_protein_18_homolog_[Bombyx_mori]
Ontology
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0007275 P multicellular organism development
GO:0007405 P neuroblast proliferation
GO:0022008 P neurogenesis
GO:0030532 C small nuclear ribonucleoprotein complex
GO:0032040 C small-subunit processome
GO:0034388 C Pwp2p-containing subcomplex of 90S preribosome
GO:0042585 C germinal vesicle
GO:0048132 P female germ-line stem cell asymmetric division
Transcript
Level		FPKM:10.35 TPM:7.94
ORF EntryO_BomoASG17418_3prime_partial:A_BomoASG_c29847_g1_i3
Sequence
(Nucleotide)
CACAGCATGACCAGTGACCACTTTTTATTTGTAATATTAAACTTGGAAGTAAAAACGCAA
ATTGTTTTCTGGTCAAAAACTTCGTTGTTACTGATCTGTAAAAAGTAGACCATAGTGTCA
CCCTTAAATATGAAACGTAGTTCCAGAAACTTTAAACACGAGATTAATCCTGTCAAAGAT
GAAGAATCACGGTTATCTCAAATACTTTTTACCAAGAAGCAAAAATTAATAGATAAATTG
AAACCTAATCAAGAATTATCAGACAATATTGATTTAAAGCCAGTATGGACTGATGATGAT
GATGGTAAATATACTGCAGCAAATATCATACCTCAAGCTGTAAGTAATGTTCAGTACACT
GAAAAACTTAAACAAAAATATAGAACTATCGTGGGAACACCCAGTTGGGCGGAAATAAAG
AAAAATACAGATTGTGAAGATGATGACAAACTGATGAAAACAGTAGGACACATAGTTAAA
AAAAAAACCAAAGAACTAAAAAAAGATTTCTTGGAATATAAAATATTACCCAAAATCAAC
AATGATATTAGTAAAGAAGGTCCTTTGATTAAATGCATAGAATTCCATCCAAAAATGAGT
GTATCATTAATAGCTGGACAATCTGGTGTTGTTTCTTTATATTCAATTGGAGGTGACAAA
AATGAAAGACTTCACAGTTTTAATCTAAAAAAGTGGCAAATAACTGCTGCACATTTTACA
CCAGATGGAAAAAGTGCTTTTATAGCCTCTAAAAGTAACCATTCTTACTGTATTTATGAT
TTAGTGAAGGCTGAAGCTAAACTTGTGCAGTTGCCACAAATCTCAAAGAGGCCACATATT
TTTCAATTGTCACCAAATGGAAAATACTTAGCAACATCAGATTGTTTTGATGAAGTATAC
TTGATAGATACAGCATCTCAAGAACTAATAAGGGTGTTAAAAAATAGCACCAATATAAAA
TCAGCAGCTTTTAACAGTAACAGCAGTGAATTATATTGCTTTGGTGACCAAGGAATAGTT
ACAGTTTGGAGTTTATGTACATTTAAATCTCTGAAAAAATTCTATGACAATGGATGTGTA
ACTGCATCATGCATAACCACTAGTGCATGTGGAAGATTGATTGCTACAGGAAGCGGAGAA
GGAATAGTGAACATTTATAAAACATCTGACCTAATGACAAATGAACCTATCCCTTTGAAG
ACAGTATCTAATATAACAACAAAAATTACATCATTAAAATTTAATTCAACCACAGAGATA
CTAGCTGCATGTTCTGCCTACTATCCTAATACTGTAAAATTAATACATATTCCC
(1314 bp)

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