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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c29843_g1_i1
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101744024_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006334 P nucleosome assembly
GO:0006338 P chromatin remodeling
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016568 P chromatin organization
GO:0016584 P nucleosome positioning
GO:0016887 F ATP hydrolysis activity
GO:0031213 C RSF complex
GO:0034080 P CENP-A containing chromatin assembly
GO:0042393 F histone binding
GO:0043392 P negative regulation of DNA binding
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0045893 P positive regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0050434 P positive regulation of viral transcription
Transcript
Level		FPKM:15.91 TPM:12.21
ORF EntryO_BomoASG17405_complete:A_BomoASG_c29843_g1_i1
Sequence
(Nucleotide)
CTGTCATTGAGTGTTATATTAGGCACCATCGAAAATTTAATGAAATCAAGGTTTATGTCT
TTTAAGAAATGAAATTATTTTCGTGAATCATGTATATATTATACAATTGCTCGTTAGTTA
TAAGTGAAATAATTATATATGGGTGTATAGAACACTATAATCATGTTGAGTGAAAAAGTG
ATTTGAGTTGGACGATGGCGTCTGACGGTGAAATTTTGTGTACGAATGATCCTAATTTTG
CTGTTATTTATTCGTTTTTAAAAGTATTCGGAAAGTTGTACGGCTTAGTGGTGCCTAGTA
TAACTAAATTGCAGGATTACATCGAAGACACGCAGGAAGTCGCGGAACCGTTGAAAGATC
TACATTTGAGACTGCTACGTCGCGCTCAAAAATCTGTTTTGAGCAGCAGATGGGAGAAGT
GTCTGATAAAATTCTGTCACCAACAAAGACATCATCAAGAGGCGTGGGAAATCGAAAGAT
TCACATACAAGAAAGCTAGCACACAAGTAAAACTAAAAGTATTAAAGATATTACTAGAGT
ATCAATTCACATGTCACCTAAAATTCAAAACTGCAGTCAATGCAATATCCTGCAAGGAAC
TGCGCTTAGATCCAATAGGAAGAGACAAGAATGGCTGTGTGTATTGGTTGGAAGTTGACC
ATGAAGCAAACTTGTGTCTGTATAAAGAAGACCAGGATGAGGAGACATGGCAACTAGTGG
CTAGGAACAGAGAAGAATTGGCCAATGTAATATCTAAATTAAAAGGAGGGGAAGATGTGT
GTCCTTTGAATATATTGAATACACAAGAAGATTCTAGTAGCACCCCGGAAGCATCTCAAC
CTGAGAAAGAAAAGCCTGAATCCCATGAAGAAGAAAATGAGGAAGAGTTCCTCAGTCCAG
AATCTGAAACAGATGCAGAAACGGATGATAAAAATGATGAAGAAGAAAATGATGAAAAAT
GTATAACAGAAGTAGAAAAAGATAAAACTGCAGAAGTAGAAAAAGATAAAACTACAGAAG
TAGAAAAAGATAAAGGTACAGAAGTAGAAAAAGATAAAAGTACAGAGGTAGAAACTTCAA
AGAGCAATGAAGAATTTAGTATTGTAACAGAAGAAAATGTTGAGTCCACTAATGAAGAAG
TTAACCAAGAACAGAAAGAAGAACCTACTCCCGAGGAACAATTTCGAGAAGTAAATGAGG
CTCATCCTCCAGAAGAATCCTCAAATTCAGAAGAGTTTCCAAAGGAGACTGTAGATGATA
TTGTAGAAAAAGATAAAACTACAGAAGTAGAAAAAGATAAAGGTACAGAAGTAGAAAAAG
ATAAAAGTACAGAGGTAGAAACTTCAAAGAGCAATGAAGAATTTAGTATTGTAACAGAAG
AAAATGTTGAGTCCACTAATGAAGAAGTTAACCAAGAACAGAAAGAAGAACCTACTCCCG
AGGAACAATTTCGAGAAGTAAATGAGGCTCATCCTCCAGAAGAATCCTCAAATTCAGAAG
AGTTTCCAAAGGAGACTGTAGATGATATTGTAGAAAAAGAACTTATAGAAAAATCTGAAA
AAGAACAACAAGAAGATGATAGAAACCTAGAAAATAAAGAAGAAGTTGGAGAGACCATTG
AAGAACCAGTTATGGTAATTACTGGTGAAGGTAACGGAGCAGATTGTGAAGGTTTATGTG
AAGAACTCAAGTATTTTAGTGAAGAGGATTCGGATTATGATAAAATATATTCTGATATAG
TTGACTGTATAGACAGACATAGTGATTTTGATAGCTCATACTTTTATGGAGATGAAATAG
TAGAAGAATTTATGTATTTTTATGGGGAAGGTTCAGGTTTCGATAATTGCACTGGTAACC
CTGAGGTCGAACATACTAACAGTGCAGAAGACAACACCGACATTGACGAAGATGCAGAAG
AATGTGTTAACGGTGAACATGAAGATAATTCTAGTGATACTAAAATAAGTAAAGATGTAA
ATTTAAAAAGTTGTGTACCCTCATTGACTAACAGATCTCTGAAGAAACAATCTAATGATA
CCGCTGAAGTATTAAAATCTGACCCTAAGAAACATTGCATTAGAGATTTAGAAAAACCTG
ATATTTCTGATACAGTACCTAGTGAAAACAGTGCTAACACAAATATAAACGAAAATAATG
ATACTGAAAATGTTACTAAAGACAGCATTAAGAAAGTGAAAGGTAGAAATAAGTTTAAAA
AGAAAGCTGGGCTTAGGAAATCAAGCATAAAAGAAAGTATAAGTTGTGTTCCTGAAACTG
ACAATGGACATGATGTTAAATCAAGTATCATTGAAAAGAGGAAAAACAGTGTGTCATCAG
AAGATCAAGAGGGCAATACTGACAATGAACGGGACAAAAGTCCAGAAAAAGGGGAAAAAG
CGGAAGACGATTTACCTACAAAAAAATTACGCTTAGAAATGACACCAGAAACTGATGGAA
ATATAACACATTCCAAGGAAAACGAATCGGATAGTATAAATAACAGTATAGAAAAAGACA
GTATAAATTCTATAAGCCAGCGGAAGAAGATAAAAGCTATAAAAGGAAAATTTAAAAGGA
AAATAAAAATTAAAAATAGCACTGTAAATAAATCTGAAGAGGATAGAAAGGTTAGTGATA
AAAAGGGTAAATCATTAAAGAGATCGATCTTGGAAGCTACAATCAGTGATAAAGACAAAA
CAGAATCTCAGAGTGACAGTGATGAAGACATACCAGTTGCTAGTGGTAAAAGATTGAAGA
CGAAACCAAAAAAACTTATCAAATCTACGAGAAAGAAAGTAGAAGCGAAACTGTTGGAAA
AACATTCTAGTGATGAATCAGATGAAGAAACTCTATACAGCTTAGCTGGCAAGAAATCGC
CTCGTAAAATTGTTAAAAAGAAATTGAAAATTAAAGACAAACAGAAGGCCACCAAGTCCA
AATCCCGTGGCGGTTCTGATGACGATGACGTGACTCCAGTGAGACAGTCCAGGCGCATAG
CTCAGCAGAAGATCAAAGAAGAGGCAGAGAGAAGGCACCAAGAGGAGGTGGCATTGCGAG
AACTCAAATTAATACACAAGAAGAAGAAGGAAGATGAAGACGAAGAGGAGTGGGTGGCGA
GTGACGTCAGCAGCCCTCGTGTGAGACGCTGGTCGGGCTCCGCGTCCGACGAGCCCAGCC
CCGACTCCGACTCTGATGAACCACTCTTCGACCAGCCCCCAGAAGAACCTGACTTGAATT
TCGACAAATCTGACCACGAGTTCTCACCTGAATCCGACTTGGAGAGCGGAGAACCCGTCG
AACCCACGAAAAGGGCAAGGACGTTACAAGAAGGTCAAGACGAAGGGTTCTGCAAGCGGT
GCGGCAGCGGGGAGCAGCCCGAGTGGATCCTGCTGTGCGACCGCTGCGACGCCGGCTACC
ACGCCAGCTGCCTCAAGCCCATGCTGTTCGTGGTGCCCGAGGGAGACTGGTTCTGTCCTC
AGTGCAACCACGAAAAACTAATAGAATCATTAGAACTTGAATTAGTGAAGTACGATGAAC
TGATGGTACTAGTCGAAGAGGAAAGGGCCAGAAAGAAGGCGGAACTGAAAGAGAAAGCGG
TAGCGGACGCTGAAGCGGGAGCGGTCCGCGAGTCCGACAAGCGGCCGGACAAGCGGGACC
AGGACTCGGAGTCGGAGGAGAGCAGCAGCAGCTGGTCGTCGTCGTCGTCGGGCGCCGTGT
ACCGGCTGCGGGCGCGCCGCCAGCTGCCCGTCAGCTACCGGAGTCAGGAGTACGACAGGC
TCATCTCCACTGCCATTAAGGAGGAGTACGTGGAGCCGACCACGAGCGCCGGGAACCAGG
GTCGGGGGAAGGACATCTCCACCATCATCGAAGCTGCCGAGGAAGAGAAGCTGAAGGCAG
AGCGCGAGGCTGTGGAGCAGGGTAAACCTTTAGAATCGAAGAAGATGAAGAGGAAACAGC
GCCGCAAGCCGAGGAAGCTGAACTCGCTCGACGTGCCCTCGGAGGACGACGACGAAACCG
ACGAAGACTTCAAAGATGTCGGCATGGAATCCTCGTCAGAAGAGATATCGTCGTCGGCTG
AGAGGGAGTCGACCGAATCTCGTTCGTCGGACTCACTGCCGATCAGAAGAACCGGTAGAA
CTGATAAGAAAGAACGTCCGAAACTGGTGGAGTCTTCTCCCGAAGTGAAGAAGAAGAAGA
AGGGAGTGTTCACGGACAGCTCCAGTGAGGCCGCCGAGCACAAGGAGTGGAAGGCTAAGA
AAAAATCGAAAGAGAAGCGTCGCGACCGTTCCAAGGGCGGCAAGAGTCGCAAGCGGCGCG
GCAGCGGCGGGCGGGGCTCGGCGCGCGTGCTGTACGGCGGCCTGTCCGACCACGAGCCGG
GCGCGCCCGCCGCACGCACGCGGCACCGCAAGATCGACTACACAGAGATGCCCAACACAG
AGTCCGAGGAGGAGATGCACAAGTCGAGCGGCAAGCACATGCCGGACAGCTCGGACGAGT
TCAAGCTGGAGGACTCGGAGGCGTCGTCGGACTCCGGGGACGACTCCCGCAAGCAGAGGG
CGCTGGCCGACCTCATCCACAAGACCGCCGTCGTGCCCATCGAGAAGCTGCCCGACCACG
TCGCCAAGGCCAAGGCCGAGGAGCTACAGAACCACCTCAGCGCG
(4664 bp)

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