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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c29793_g1_i2
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		nuclear_fragile_X_mental_retardation-interacting_protein_1_[Bombyx_mori]
Ontology
GO:0000492 P box C/D snoRNP assembly
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005726 C perichromatin fibrils
GO:0005730 C nucleolus
GO:0008023 C transcription elongation factor complex
GO:0016363 C nuclear matrix
GO:0022626 C cytosolic ribosome
GO:0030515 F snoRNA binding
GO:0030674 F protein-macromolecule adaptor activity
GO:0042802 F identical protein binding
GO:0043234 C protein-containing complex
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0048786 C presynaptic active zone
GO:0051117 F ATPase binding
GO:0051259 P protein complex oligomerization
GO:0070761 C pre-snoRNP complex
Transcript
Level		FPKM:10.49 TPM:8.05
ORF EntryO_BomoASG17285_complete:A_BomoASG_c29793_g1_i2
Sequence
(Nucleotide)
TGTGAACTTCCAAATCGACGGACCCAAAAAGAAAGTTTAGCCAAATTCATTAATAATTTG
TGGCGTAGGTAACTTGAATGAGTTGAATTAAAAAGACGAAAACTACATCAGATTCAGGGA
TCGCTGTTAAAAAAGTTAACGCATGGTATAAGATGCAATATGAACCCTATTGAATTAAGT
AGGTATATACCGCAGTCTCCAAGAATGCCGAACTATCCACGATTTTGTTTTCCGAATACT
CAATGGCGATTCAACTATGGCCCACGTGTGTCTTCTTGGTCGAATCAAACCCAATCCATT
ATTGATAGAAATGAAGAACATTGGTGTGAAACTTGTGATAGAGGATTTCCTAATGCAGTC
ATTCTGGAGAAACATAAAAATCAACATGAAAAATGCAATATAGATGGATGCGGATTTGTA
GCACATCCAAAGATAATAACCAAACACATACAAATGCAGCACTCGACTGGTCTTTACAAA
AAAATTGCTAAATTAAATAATCCAGAGGAAATAAAGACATGGCGAGAAGATAGAAGAAGA
AACTATCCAACACAAGCTAATATTGAGAAAAAAGCTGCAATGGTTAGGGAGAAAATTGAA
AGAGGTGAAAAAATGGGACTTTCAAGAGACAAGAATATGTGTGACAATAAAAAATCAGGT
ATGAACAGAAAATACAAAAGTGATAATAGGAAATTCAATAACAAATGTGAACTAAATAGA
AGAAAACCAATTGAACAAAAATTTAAAGCAAATCAGAAACCTTCCCAAACACCATTTAAA
AAAACAAAAGTTCTACCAGTTCTTGATGATAAAAGATCAATTAAACCATTTTCTGGTATA
CAAGATATTCTGTCAGAAAGTGTAACTCCAGAAGATATTATGGAAACAGAAAAATTTGAC
CTTGGCATTGAAGATGATGATGTGAGTGAAGAAAATGTACTTAACACAAAAACAAACATT
AGTTCTGAGTCAACTGTATGTAATGCCCTTTCTTTACTTATTTGTGAATATGGGTCTTCT
GATGATGATGAGACTACTGTATCAAAGGAAAACATTATTGACAAATGTAACCAAAATTCA
GAAACAAATGGAAATCTTCATAAAGTCAACTCAGATCCTAAAAGTGTAGCCATACCTAAT
TTAAGTGTACCTGAAATGTCAGAACATAAAAGAAAAGATAGTAAAAGCTGTCTTTTGGAT
GTTGATGATGATGGCCCTGAAGAAATAGCAATATTAAAGAAGGACATAACAGAACTTACT
CCGGATATAATACCTGATAAAAAATCAGTTCCTATAGAGAAAAAAGAAAAAATTAAGAGT
TACCCTACAAAAGTAATTAAAAAACCACCAAGGTCAAGGGTGCCCTCTACACTTTTACAA
AAACTACTTTTTAAGGAAGTGAAACAGGAACGTAATATTATTTTGCAGTGTATAAGACAT
ATAAGAAAAAACAACTATTTTACCAAATAAATATTGATGCTTGAAAGGCAAACATGACTA
AGTGACAATAACTGTTTTGTACATAAATGATAGGCAATA
(1539 bp)

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