SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c29774_g1_i8
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		copia_protein_[Lasius_niger]
Ontology
GO:0003676 F nucleic acid binding
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:3.64 TPM:2.79
ORF EntryO_BomoASG17246_3prime_partial:A_BomoASG_c29774_g1_i8
Sequence
(Nucleotide)
CTATTTTTGAGAAAAATAGGGAAACATCAGTATCGCATTTGAGCGAATAAAACTTCTGTT
GCTCAAGGTGCAAGGATGTTGACGATTTCTTTTCATAGATATTATTTAATTTCGTCCACA
TCTCGGCAGACGTAGTGGCAGTAAGTAGATGTGTCATTATACTCTGTTCAATATGGAAAA
CAATCCAACCTTGTGCCTTACTATCTTTTGAAATCCAATCCTGGTACTCCGTCGATTTAT
CATTACGGGGTTTAGGTATGGAACCATCCACGATCTCAAATAGGCCTTTGGCCTTTAGAA
TAACCCTCATCTGAAATTTCCAGGTGCACCATGTCGCACTTCCATTTAACTTTACTCCAG
AAATTGATTGCGGTTGAGACAGATCCATTTTCGTCCACTCTTACGATGACCGGCGAATTT
AAACAAAAATGGCGTCCGATGGCGTCTCAAAATCTCAACACGGCCAACACAGCCAACGAA
AATTTCACACAAGATGTTTGTTCTCACCGTAATGTATGCAGTGGTGTATTCTGGGCTCAT
AACCTGTGATGAGTTATGGGCTTGTATAATGTTTTTGATGGTAAAAGTTATTAAAACTCG
GTGGAGAAAATAATCACGTCGTTCTTTTATTAATTTATAACCTCAAAGAGTTACAATCAT
AGATTAAACATAAACATGAGTTATTGTGCCACAGACAACTAATTTTTATATTTATTGGCG
ACTACATTTCACAGTGAGCTCGTCCACACATCTAAGCAATAAAAAAATAAAATAGCTGAA
ATACTAGCTAGACCAGCTATTTGGAAGTCTAGCCACCCAAAGTATTTCTCGTACTTCTTG
TGGAATTTTCCATCTATAGGTATACTCCGATTCTTATTCAAATCATGTACTTCACAATCT
TTTCCAAATAATAGGTCCTGAACCAAAAAACTATTAATTTGTAAGCAATATCGAGATAAT
TTCGATATAGACATTTCGCTGTCGGACTTCCTTACTAGTCGCGGCGGCGAACGTGAGTAC
CCGTGGCCTGCAAACGGTGCTGCGCGAATGGTCGCCTCATCCACAGCTTCGTCGTTCGTA
CCGCCGATCCCCGTGGCCAGGCCGTAAAGACTGTAGTTTCTAATATGAGATTATTTAGCA
GTTGTGCCATCTCAGCTGAGCGGCAGAATTATCTAGAAAGATGGTAACTCATTGTGTGGG
CTTACAAGCAGT
(1212 bp)

- SilkBase 1999-2023 -