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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c29748_g1_i5
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		E3_ubiquitin-protein_ligase_HECTD1_isoform_X1_[Bombyx_mori]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0010091 P trichome branching
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042023 P DNA endoreduplication
GO:0042787 P ubiquitin-dependent protein catabolic process
Transcript
Level		FPKM:9.22 TPM:7.07
ORF EntryO_BomoASG17173_complete:A_BomoASG_c29748_g1_i5
Sequence
(Nucleotide)
CGGCGGTGGTCGCGCGGCCGCGGCGTGTGTGCGGGCGCGCGCGTCTCCCGCGGCCCCGAC
TGGAAGTGGCGCGACCAGGACGGGCCGCACCCCGCACTCGGCACTCTCACTTCCGAACTG
CACAACGGGTGGGTCGATGTCAGGTGGGACCACGGAGTTCGCAATTCGTATCGCATGGGT
GCAGAGGGAAAGTTCGACTTGAAAGTTGTGAGCGGTGGTACTGTCATCGAAAGTTCAAAA
GCCAGCCGGAAGAGTCACTCAACTCCCAGTTTGCCTGACGCCACTTCTGTCGATCAGGTA
TCAGTAGCGTCGACGGAACAGGCCTCGTCAGCGGACAATATATCGAGTGAAGAGATGGTC
AGTAATATGTCAAGACCCCGTACGCACGCCACAGATCTCTCTGCCATTAATAATTCGACG
CATCATATAAACTCTGATCTCGCGACAATAGTGGAGTCATTGACGTTGGGCGCCGAAAGT
AACAATTGCATCACCGAGTTGGGGAATACATCGTTTACCAACATGGAAATGGGACCTACG
AGCATTACGGATATCACCAAACCTTATCCCGCCAAAGAGCCGTTACCCGAATCCAGTGCA
CACGAGTGCGACGAAAATGAAGCCGGGGAAAGTCAATACGGTGATAATAAGAAGGAAAGT
CAGTCCGGTTCGGGCACCATGAGCGCTAGCGAACCTGATTTGACGCAGCAGGGCACAGGA
CGCCTGTTGGAGTCGCTGGGCGTGGGCCGCGGCAACAGTGCAGGACGAGGCAGCAACGTG
CCGCGCTCGAACCGTAACAATCATTCCTCTGGTCTCCTACCTAGTTTGGTGCGTTTAGCG
TTGTCGAGCAACTTCCCCGGCGGGCTGCTGTCGGCGGCGCAGAGCTACCCCTCGCTGTCG
TCCAACGCGCAGAACGCGCTCACGCTGTCGCTCACATCCACGTCCAGCGAAAGCGAACAG
GTCTCATTAGAAGACTTTTTGGAGTCTTGTCGTGCTCCCGCGTTGTTGACAGAGTTGGAA
GATGATGAAGACGGTGATGAGGCGCTGGACAGCGACAAAGAGAACGAACCCACTTACCAG
GAGGTAGTCAGTAAACTTTTGGTATCTCGTAATTTGCTCTCTCTGATGGAGGAAGAAGCT
TTAGAGGCTCTACGTGGCAGCTCGGGATCTGGACAAAACAATCGCTCGCGCCGACCCTGG
GACGACGACTTCGTGCTCAAGCGACAGTTCTCAGCGCTCATACCGGCCTTCGATCCTCGC
CCGGGAAGAACGAATCTCAACCAAACTGTCGATCTCGAAATACCTCTGAACGAGGAGTCC
GAAGAGGAGGAGAGTTGGGAAGAAGTGCCAGAGAACGTCGGCGGCGGCGCGACTAGCGAG
ACCGGTCGCGCCCCGGCGCTGCGCCTGGTACTGAGCGCGGGCGGGGCCTCGCTGCCGCTG
GCGCGCGGCTCCTGGACGCTGTACCGCGCCGTGCTGCTGCTGCACGCCCGCCTGCCGCAC
GCAGACCTCCATCGAGATACCACATACACTTTAACATACAAGGAGGTGGAGGGTTCAGAG
GGCGCATTTGCTTCGAGTGACACTGAAGATGATGAACCTAATGATCCAGAAGGCGGTATA
GTGGGTGCAGAGGGGAGCGAGGGCGGCATGGCCACGAGCTGCGTGCGCGTGCTGCGGCGC
CTGCGAGCGGCCGCGCCCGAGCTGCCCGCCGAGCCCTTCCTCTCCACCAAGCTCACCAAC
AAGCTGCATCTCCAGCTGCAGGAGCCGCTCGCGCTCGCCGCCGCCGCCACTCCGCATTGG
TGTCAGCAACTGATCGATTGGTGTCCATTTCTGTTTCCACTCGAAACAAGACAAATGTTT
TTCGCATGCACCGCGTTTGGAACGTCCCGGACCATCGTCTGGCTGCAAGCGCAACGTGAC
CGTGCTTTGGACAGACAGAGAGCGACCAACACGGTGTCACCGCGCCGAGCGGAGCTGGAA
GCGACTGAATTCCGCATGGGTCGCCTCAGACACGAGCGCGTTCGGATTCCGAGAGATCCC
GACATGCTGCGTTCTGCTATTCAGGTGATGCGAGTGCACGCGAGTCGCAAGTCTGTATTA
GAGGTGGAATTCGCGGGCGAGGAGGGCACTGGTCTCGGGCCCACGCTGGAGTTCTACGCG
CTGGTGGCGGCCGAGCTGCAGCGCGCCGACCTCGCCCTGTGGCTGCACGACGCGCCGCTG
CACGTCGATGACGACGCGCCGCTGCACCTCATGCAGCCCACAGAAAAGCCACCCGGTTAC
TACGTGAGCCGGCCCGGTGGCCTGTTTCCGGCTCCACTTCCGCAAGAATCCCCTATCTGT
GATAAAGTGTGCAAATATTTCTGGTTTTTAGGAGTATTTTTAGCTAAGGTATTACAAGAC
GGCCGACTAGTTGACTTGCCTCTGTCAGAGCCGTTCTTACGTATAATGTGTGGTGAAGAG
TTAACGAAAGAGAATTTACAAGAAATCGATCCCATTAGACATAGATTCTTAGAGAAGATG
CTCGAAGCAGCCGAGGGGTACGACAAAATAATGCGTGATGAATCCTTGGACGAGAACGAG
AAGCAGAAACGTGTCAGTGAGTTAAATGTAGACGGCGCCGCTTTTGAAGAATTGTCTTTA
ACTATGACGCACATCGCACCCAACGTCGACCCCGCTGTCGCCGTGCAACCGCTCTGTGAT
GGCGGAGAACATATCGAGGTGGGCGCGCACAACGCTCGTCTGTACGCGGAGTGGAGCGCG
CGCTGGATGGTGTCGGCGGGCGTGCGGCGCCAGGTGGCGTGGTTCAAGCGCGGGTTCGCA
CGCGTGTTCCCGCCGCGACGCCTGCGGGCCTTCTCTCCTTCCGAGCTGCGCCTGCTGCTC
TGCGGGGAACGCGGCCCCGTCTGGACCAGGGAACATCTGCTGCAGTATACCGAGCCTAAA
CTCGGATACACCAGAGATAGTCCGGGATTCCTTCGTCTGGTTGACGTTCTGGTTGAGATG
TCGATCTGCGAGCGTAAAGCATTCCTGCAGTTCGCGACGGGATGCAGCAGCCTGCCGCCC
GGCGGACTCGCCAACCTGCATCCTCGACTCACGGTCGTACGGAAGGTCGACGCCGGAGAT
GGATCGTACCCTTCAGTGAACACCTGCGTGCACTACCTGAAGTTGCCCGAGTATTCGTGT
AAGGAAGTGCTACGCGAACGTTTGCTGGCCGCGACCAACGAGCGCGGCTTTCATTTAAAT
TAATTCCTAATAATATAATCGTGTTTATATCAAAATATATTGTAACTATATTTGAACATT
TACACGCATCAATGCTGCACTTTGCCTTTATATACTCTTGATTTTTAAGTAATGTCGAAA
ATTAATTCAAAGCTGTCCCGTTTTGTTACTCTTACTGAAATAATGTGCTTGAATATAATA
CAATTGTATTTAATAGTTCAAATTCTTTAAATTAAGCTGCTATTACATTTTATCCAAATT
AAAATACACAAATATGTGAGTAAGATGACTAAAGATTGAATTGATTAAATGAGTAAAATT
CAATTTAATTAACAACAATTTGTAACATGCCTACAAGAAATGTTTTCAATATATCGATTC
TGGAAATAGTATGTATTTAAATGAAAGTTGTTTACTATCATTAAATTCGTGTTAGTAAAT
CGGAAACACCAATTATCTAAAATAAATAATATCTAGGCGTAGATTTAGTTAATAAGTAAA
TTTATTGATCGTGCTTAAATTCTAATCTTCGTTTAATTTTCATGGAGGCGCTGTATAATC
AATAACAAATTCTAGTATTACAATAATGCTATAGGTGAGATACGACCGGTACATAATTCC
GAAAAGTATTCTGTCCCCAATAAAATATAAACATTTTAGAAACTCAGTCTAAAAAAATAA
AAATAGTATTATGATTGATGTATTATAAAAAAATCGAAAATTAATACGATACCATCAGAT
ATGTATGGTAATACGATTTGCAACTTTCCATAAATGCTTTCAGCCTTCAAGCAGATGCGA
AACTCATTGCATCTAGCTATCAGACAGCGCCTAGTTTAATAAATAATCAAGATTGATAGA
AGAACTAGAGCACTTTGTAATTTAAAACGATATTTTGACAGCTAATAGCTCTGGAGCTCT
TGATTAATATACAAACATACAAGAACCAATATAAGGTCTTACAGTTTTTTAAATAATAAA
AAAAAAACAGCTATTAAGTCATACGTTTTAAATTAAGTAAATAAAACCATGAAATGTTCC
TTTGTGTAGGAATGTTTGTTATTTTTGATTGAATTTTATAGGCAAGAAATATCCATGAAA
ATAAGTAATGGTGAAAAAATGTTGTAAAATGACAAATATTAATGTTTTAAAGATGAAAGG
AAGAGAGTAGCAGTAATGACATGAAACGTTTTATGTTATTTGGTTTCAAATTTCTAACTT
TTCATATCTGGACGTATTTTAAATTTATTTTAATTTTAGATCTCATTAAAAACTGATTAT
ATGAAGTAGAATGTATAAAAACCCATTTAGAAAAGTCAAATTTCATTTTGTAAGCTTTTG
CGTTTCGACAACTATAGATTAATTTAAAAAGTATCCCCTTTAACTCTACCAATATGATAC
AATTTGGTGTTTTTTTGTAAATGAATAACACATTAAGCGCCTGATGCGGTCATTCTGTAT
TTGTACATATATTGATCTACAGTGGATTTGATGAAATCATATTGATGATATTTAGACCAA
AAAGAACAGGAGACTCGAGTGTCGCATTAATCAATGCTTGTAAGGGTCTCCGACGTTAAG
GTGTGAAACACTAATAATATCGCGTGTTTATGAAATTTAACTGATTAGCTG
(4851 bp)

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