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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c29748_g1_i3
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		E3_ubiquitin-protein_ligase_HECTD1_isoform_X1_[Bombyx_mori]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0010091 P trichome branching
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042023 P DNA endoreduplication
GO:0042787 P ubiquitin-dependent protein catabolic process
Transcript
Level		FPKM:5.49 TPM:4.21
ORF EntryO_BomoASG17168_complete:A_BomoASG_c29748_g1_i3
Sequence
(Nucleotide)
CGGCGGTGGTCGCGCGGCCGCGGCGTGTGTGCGGGCGCGCGCGTCTCCCGCGGCCCCGAC
TGGAAGTGGCGCGACCAGGACGGGCCGCACCCCGCACTCGGCACTCTCACTTCCGAACTG
CACAACGGGTGGGTCGATGTCAGGTGGGACCACGGAGTTCGCAATTCGTATCGCATGGGT
GCAGAGGGAAAGTTCGACTTGAAAGTTGTGAGCGGTGGTACTGTCATCGAAAGTTCAAAA
GCCAGCCGGAAGAGTCACTCAACTCCCAGTTTGCCTGACGCCACTTCTGTCGATCAGGTA
TCAGTAGCGTCGACGGAACAGGCCTCGTCAGCGGACAATATATCGAGTGAAGAGATGGTC
AGTAATATGTCAAGACCCCGTACGCACGCCACAGATCTCTCTGCCATTAATAATTCGACG
CATCATATAAACTCTGTGTTTGACATAGATCTCGCGACAATAGTGGAGTCATTGACGTTG
GGCGCCGAAAGTAACAATTGCATCACCGAGTTGGGGAATACATCGTTTACCAACATGGAA
ATGGGACCTACGAGCATTACGGATATCACCAAACCTTATCCCGCCAAAGAGCCGTTACCC
GAATCCAGTGCACACGAGTGCGACGAAAATGAAGCCGGGGAAAGTCAATACGGTGATAAT
AAGAAGGAAAGTCAGTCCGGTTCGGGCACCATGAGCGCTAGCGAACCTGATTTGACGCAG
CAGGGCACAGGACGCCTGTTGGAGTCGCTGGGCGTGGGCCGCGGCAACAGTGCAGGACGA
GGCAGCAACGTGCCGCGCTCGAACCGTAACAATCATTCCTCTGGTCTCCTACCTAGTTTG
GTGCGTTTAGCGTTGTCGAGCAACTTCCCCGGCGGGCTGCTGTCGGCGGCGCAGAGCTAC
CCCTCGCTGTCGTCCAACGCGCAGAACGCGCTCACGCTGTCGCTCACATCCACGTCCAGC
GAAAGCGAACAGGTCTCATTAGAAGACTTTTTGGAGTCTTGTCGTGCTCCCGCGTTGTTG
ACAGAGTTGGAAGATGATGAAGACGGTGATGAGGCGCTGGACAGCGACAAAGAGAACGAA
CCCACTTACCAGGAGGTAGTCAGTAAACTTTTGGTATCTCGTAATTTGCTCTCTCTGATG
GAGGAAGAAGCTTTAGAGGCTCTACGTGGCAGCTCGGGATCTGGACAAAACAATCGCTCG
CGCCGACCCTGGGACGACGACTTCGTGCTCAAGCGACAGTTCTCAGCGCTCATACCGGCC
TTCGATCCTCGCCCGGGAAGAACGAATCTCAACCAAACTGTCGATCTCGAAATACCTCTG
AACGAGGAGTCCGAAGAGGAGGAGAGTTGGGAAGAAGTGCCAGAGAACGTCGGCGGCGGC
GCGACTAGCGAGACCGGTCGCGCCCCGGCGCTGCGCCTGGTACTGAGCGCGGGCGGGGCC
TCGCTGCCGCTGGCGCGCGGCTCCTGGACGCTGTACCGCGCCGTGCTGCTGCTGCACGCC
CGCCTGCCGCACGCAGACCTCCATCGAGATACCACATACACTTTAACATACAAGGAGGTG
GAGGGTTCAGAGGGCGCATTTGCTTCGAGTGACACTGAAGATGATGAACCTAATGATCCA
GAAGGCGGTATAGTGGGTGCAGAGGGGAGCGAGGGCGGCATGGCCACGAGCTGCGTGCGC
GTGCTGCGGCGCCTGCGAGCGGCCGCGCCCGAGCTGCCCGCCGAGCCCTTCCTCTCCACC
AAGCTCACCAACAAGCTGCATCTCCAGCTGCAGGAGCCGCTCGCGCTCGCCGCCGCCGCC
ACTCCGCATTGGTGTCAGCAACTGATCGATTGGTGTCCATTTCTGTTTCCACTCGAAACA
AGACAAATGTTTTTCGCATGCACCGCGTTTGGAACGTCCCGGACCATCGTCTGGCTGCAA
GCGCAACGTGACCGTGCTTTGGACAGACAGAGAGCGACCAACACGGTGTCACCGCGCCGA
GCGGAGCTGGAAGCGACTGAATTCCGCATGGGTCGCCTCAGACACGAGCGCGTTCGGATT
CCGAGAGATCCCGACATGCTGCGTTCTGCTATTCAGGTGATGCGAGTGCACGCGAGTCGC
AAGTCTGTATTAGAGGTGGAATTCGCGGGCGAGGAGGGCACTGGTCTCGGGCCCACGCTG
GAGTTCTACGCGCTGGTGGCGGCCGAGCTGCAGCGCGCCGACCTCGCCCTGTGGCTGCAC
GACGCGCCGCTGCACGTCGATGACGACGCGCCGCTGCACCTCATGCAGCCCACAGAAAAG
CCACCCGGTTACTACGTGAGCCGGCCCGGTGGCCTGTTTCCGGCTCCACTTCCGCAAGAA
TCCCCTATCTGTGATAAAGTGTGCAAATATTTCTGGTTTTTAGGAGTATTTTTAGCTAAG
GTATTACAAGACGGCCGACTAGTTGACTTGCCTCTGTCAGAGCCGTTCTTACGTATAATG
TGTGGTGAAGAGTTAACGAAAGAGAATTTACAAGAAATCGATCCCATTAGACATAGATTC
TTAGAGAAGATGCTCGAAGCAGCCGAGGGGTACGACAAAATAATGCGTGATGAATCCTTG
GACGAGAACGAGAAGCAGAAACGTGTCAGTGAGTTAAATGTAGACGGCGCCGCTTTTGAA
GAATTGTCTTTAACTATGACGCACATCGCACCCAACGTCGACCCCGCTGTCGCCGTGCAA
CCGCTCTGTGATGGCGGAGAACATATCGAGGTGGGCGCGCACAACGCTCGTCTGTACGCG
GAGTGGAGCGCGCGCTGGATGGTGTCGGCGGGCGTGCGGCGCCAGGTGGCGTGGTTCAAG
CGCGGGTTCGCACGCGTGTTCCCGCCGCGACGCCTGCGGGCCTTCTCTCCTTCCGAGCTG
CGCCTGCTGCTCTGCGGGGAACGCGGCCCCGTCTGGACCAGGGAACATCTGCTGCAGTAT
ACCGAGCCTAAACTCGGATACACCAGAGATAGTCCGGGATTCCTTCGTCTGGTTGACGTT
CTGGTTGAGATGTCGATCTGCGAGCGTAAAGCATTCCTGCAGTTCGCGACGGGATGCAGC
AGCCTGCCGCCCGGCGGACTCGCCAACCTGCATCCTCGACTCACGGTCGTACGGAAGGTC
GACGCCGGAGATGGATCGTACCCTTCAGTGAACACCTGCGTGCACTACCTGAAGTTGCCC
GAGTATTCGTGTAAGGAAGTGCTACGCGAACGTTTGCTGGCCGCGACCAACGAGCGCGGC
TTTCATTTAAATTAATTCCTAATAATATAATCGTGTTTATATCAAAATATATTGTAACTA
TATTTGAACATTTACACGCATCAATGCTGCACTTTGCCTTTATATACTCTTGATTTTTAA
GTAATGTCGAAAATTAATTCAAAGCTGTCCCGTTTTGTTACTCTTACTGAAATAATGTGC
TTGAATATAATACAATTGTATTTAATAGTTCAAATTCTTTAAATTAAGCTGCTATTACAT
TTTATCCAAATTAAAATACACAAATATGTGAGTAAGATGACTAAAGATTGAATTGATTAA
ATGAGTAAAATTCAATTTAATTAACAACAATTTGTAACATGCCTACAAGAAATGTTTTCA
ATATATCGATTCTGGAAATAGTATGTATTTAAATGAAAGTTGTTTACTATCATTAAATTC
GTGTTAGTAAATCGGAAACACCAATTATCTAAAATAAATAATATCTAGGCGTAGATTTAG
TTAATAAGTAAATTTATTGATCGTGCTTAAATTCTAATCTTCGTTTAATTTTCATGGAGG
CGCTGTATAATCAATAACAAATTCTAGTATTACAATAATGCTATAGGTGAGATACGACCG
GTACATAATTCCGAAAAGTATTCTGTCCCCAATAAAATATAAACATTTTAGAAACTCAGT
CTAAAAAAATAAAAATAGTATTATGATTGATGTATTATAAAAAAATCGAAAATTAATACG
ATACCATCAGATATGTATGGTAATACGATTTGCAACTTTCCATAAATGCTTTCAGCCTTC
AAGCAGATGCGAAACTCATTGCATCTAGCTATCAGACAGCGCCTAGTTTAATAAATAATC
AAGATTGATAGAAGAACTAGAGCACTTTGTAATTTAAAACGATATTTTGACAGCTAATAG
CTCTGGAGCTCTTGATTAATATACAAACATACAAGAACCAATATAAGGTCTTACAGTTTT
TTAAATAATAAAAAAAAAACAGCTATTAAGTCATACGTTTTAAATTAAGTAAATAAAACC
ATGAAATGTTCCTTTGTGTAGGAATGTTTGTTATTTTTGATTGAATTTTATAGGCAAGAA
ATATCCATGAAAATAAGTAATGGTGAAAAAATGTTGTAAAATGACAAATATTAATGTTTT
AAAGATGAAAGGAAGAGAGTAGCAGTAATGACATGAAACGTTTTATGTTATTTGGTTTCA
AATTTCTAACTTTTCATATCTGGACGTATTTTAAATTTATTTTAATTTTAGATCTCATTA
AAAACTGATTATATGAAGTAGAATGTATAAAAACCCATTTAGAAAAGTCAAATTTCATTT
TGTAAGCTTTTGCGTTTCGACAACTATAGATTAATTTAAAAAGTATCCCCTTTAACTCTA
CCAATATGATACAATTTGGTGTTTTTTTGTAAATGAATAACACATTAAGCGCCTGATGCG
GTCATTCTGTATTTGTACATATATTGATCTACAGTGGATTTGATGAAATCATATTGATGA
TATTTAGACCAAAAAGAACAGGAGACTCGAGTGTCGCATTAATCAATGCTTGTAAGGGTC
TCCGACGTTAAGGTGTGAAACACTAATAATATCGCGTGTTTATGAAATTTAACTGATTAG
CTG
(4863 bp)

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