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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c29748_g1_i2
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		E3_ubiquitin-protein_ligase_HECTD1_isoform_X2_[Bombyx_mori]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0010091 P trichome branching
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042023 P DNA endoreduplication
GO:0042787 P ubiquitin-dependent protein catabolic process
Transcript
Level		FPKM:2.70 TPM:2.07
ORF EntryO_BomoASG17163_complete:A_BomoASG_c29748_g1_i2
Sequence
(Nucleotide)
CGGCGGTGGTCGCGCGGCCGCGGCGTGTGTGCGGGCGCGCGCGTCTCCCGCGGCCCCGAC
TGGAAGTGGCGCGACCAGGACGGGCCGCACCCCGCACTCGGCACTCTCACTTCCGAACTG
CACAACGGGTGGGACCACGGAGTTCGCAATTCGTATCGCATGGGTGCAGAGGGAAAGTTC
GACTTGAAAGTTGTGAGCGGTGGTACTGTCATCGAAAGTTCAAAAGCCAGCCGGAAGAGT
CACTCAACTCCCAGTTTGCCTGACGCCACTTCTGTCGATCAGGTATCAGTAGCGTCGACG
GAACAGGCCTCGTCAGCGGACAATATATCGAGTGAAGAGATGGTCAGTAATATGTCAAGA
CCCCGTACGCACGCCACAGATCTCTCTGCCATTAATAATTCGACGCATCATATAAACTCT
GTGTTTGACATAGATCTCGCGACAATAGTGGAGTCATTGACGTTGGGCGCCGAAAGTAAC
AATTGCATCACCGAGTTGGGGAATACATCGTTTACCAACATGGAAATGGGACCTACGAGC
ATTACGGATATCACCAAACCTTATCCCGCCAAAGAGCCGTTACCCGAATCCAGTGCACAC
GAGTGCGACGAAAATGAAGCCGGGGAAAGTCAATACGGTGATAATAAGAAGGAAAGTCAG
TCCGGTTCGGGCACCATGAGCGCTAGCGAACCTGATTTGACGCAGCAGGGCACAGGACGC
CTGTTGGAGTCGCTGGGCGTGGGCCGCGGCAACAGTGCAGGACGAGGCAGCAACGTGCCG
CGCTCGAACCGTAACAATCATTCCTCTGGTCTCCTACCTAGTTTGGTGCGTTTAGCGTTG
TCGAGCAACTTCCCCGGCGGGCTGCTGTCGGCGGCGCAGAGCTACCCCTCGCTGTCGTCC
AACGCGCAGAACGCGCTCACGCTGTCGCTCACATCCACGTCCAGCGAAAGCGAACAGGTC
TCATTAGAAGACTTTTTGGAGTCTTGTCGTGCTCCCGCGTTGTTGACAGAGTTGGAAGAT
GATGAAGACGGTGATGAGGCGCTGGACAGCGACAAAGAGAACGAACCCACTTACCAGGAG
GTAGTCAGTAAACTTTTGGTATCTCGTAATTTGCTCTCTCTGATGGAGGAAGAAGCTTTA
GAGGCTCTACGTGGCAGCTCGGGATCTGGACAAAACAATCGCTCGCGCCGACCCTGGGAC
GACGACTTCGTGCTCAAGCGACAGTTCTCAGCGCTCATACCGGCCTTCGATCCTCGCCCG
GGAAGAACGAATCTCAACCAAACTGTCGATCTCGAAATACCTCTGAACGAGGAGTCCGAA
GAGGAGGAGAGTTGGGAAGAAGTGCCAGAGAACGTCGGCGGCGGCGCGACTAGCGAGACC
GGTCGCGCCCCGGCGCTGCGCCTGGTACTGAGCGCGGGCGGGGCCTCGCTGCCGCTGGCG
CGCGGCTCCTGGACGCTGTACCGCGCCGTGCTGCTGCTGCACGCCCGCCTGCCGCACGCA
GACCTCCATCGAGATACCACATACACTTTAACATACAAGGAGGTGGAGGGTTCAGAGGGC
GCATTTGCTTCGAGTGACACTGAAGATGATGAACCTAATGATCCAGAAGGCGGTATAGTG
GGTGCAGAGGGGAGCGAGGGCGGCATGGCCACGAGCTGCGTGCGCGTGCTGCGGCGCCTG
CGAGCGGCCGCGCCCGAGCTGCCCGCCGAGCCCTTCCTCTCCACCAAGCTCACCAACAAG
CTGCATCTCCAGCTGCAGGAGCCGCTCGCGCTCGCCGCCGCCGCCACTCCGCATTGGTGT
CAGCAACTGATCGATTGGTGTCCATTTCTGTTTCCACTCGAAACAAGACAAATGTTTTTC
GCATGCACCGCGTTTGGAACGTCCCGGACCATCGTCTGGCTGCAAGCGCAACGTGACCGT
GCTTTGGACAGACAGAGAGCGACCAACACGGTGTCACCGCGCCGAGCGGAGCTGGAAGCG
ACTGAATTCCGCATGGGTCGCCTCAGACACGAGCGCGTTCGGATTCCGAGAGATCCCGAC
ATGCTGCGTTCTGCTATTCAGGTGATGCGAGTGCACGCGAGTCGCAAGTCTGTATTAGAG
GTGGAATTCGCGGGCGAGGAGGGCACTGGTCTCGGGCCCACGCTGGAGTTCTACGCGCTG
GTGGCGGCCGAGCTGCAGCGCGCCGACCTCGCCCTGTGGCTGCACGACGCGCCGCTGCAC
GTCGATGACGACGCGCCGCTGCACCTCATGCAGCCCACAGAAAAGCCACCCGGTTACTAC
GTGAGCCGGCCCGGTGGCCTGTTTCCGGCTCCACTTCCGCAAGAATCCCCTATCTGTGAT
AAAGTGTGCAAATATTTCTGGTTTTTAGGAGTATTTTTAGCTAAGGTATTACAAGACGGC
CGACTAGTTGACTTGCCTCTGTCAGAGCCGTTCTTACGTATAATGTGTGGTGAAGAGTTA
ACGAAAGAGAATTTACAAGAAATCGATCCCATTAGACATAGATTCTTAGAGAAGATGCTC
GAAGCAGCCGAGGGGTACGACAAAATAATGCGTGATGAATCCTTGGACGAGAACGAGAAG
CAGAAACGTGTCAGTGAGTTAAATGTAGACGGCGCCGCTTTTGAAGAATTGTCTTTAACT
ATGACGCACATCGCACCCAACGTCGACCCCGCTGTCGCCGTGCAACCGCTCTGTGATGGC
GGAGAACATATCGAGGTGGGCGCGCACAACGCTCGTCTGTACGCGGAGTGGAGCGCGCGC
TGGATGGTGTCGGCGGGCGTGCGGCGCCAGGTGGCGTGGTTCAAGCGCGGGTTCGCACGC
GTGTTCCCGCCGCGACGCCTGCGGGCCTTCTCTCCTTCCGAGCTGCGCCTGCTGCTCTGC
GGGGAACGCGGCCCCGTCTGGACCAGGGAACATCTGCTGCAGTATACCGAGCCTAAACTC
GGATACACCAGAGATAGTCCGGGATTCCTTCGTCTGGTTGACGTTCTGGTTGAGATGTCG
ATCTGCGAGCGTAAAGCATTCCTGCAGTTCGCGACGGGATGCAGCAGCCTGCCGCCCGGC
GGACTCGCCAACCTGCATCCTCGACTCACGGTCGTACGGAAGGTCGACGCCGGAGATGGA
TCGTACCCTTCAGTGAACACCTGCGTGCACTACCTGAAGTTGCCCGAGTATTCGTGTAAG
GAAGTGCTACGCGAACGTTTGCTGGCCGCGACCAACGAGCGCGGCTTTCATTTAAATTAA
TTCCTAATAATATAATCGTGTTTATATCAAAATATATTGTAACTATATTTGAACATTTAC
ACGCATCAATGCTGCACTTTGCCTTTATATACTCTTGATTTTTAAGTAATGTCGAAAATT
AATTCAAAGCTGTCCCGTTTTGTTACTCTTACTGAAATAATGTGCTTGAATATAATACAA
TTGTATTTAATAGTTCAAATTCTTTAAATTAAGCTGCTATTACATTTTATCCAAATTAAA
ATACACAAATATGTGAGTAAGATGACTAAAGATTGAATTGATTAAATGAGTAAAATTCAA
TTTAATTAACAACAATTTGTAACATGCCTACAAGAAATGTTTTCAATATATCGATTCTGG
AAATAGTATGTATTTAAATGAAAGTTGTTTACTATCATTAAATTCGTGTTAGTAAATCGG
AAACACCAATTATCTAAAATAAATAATATCTAGGCGTAGATTTAGTTAATAAGTAAATTT
ATTGATCGTGCTTAAATTCTAATCTTCGTTTAATTTTCATGGAGGCGCTGTATAATCAAT
AACAAATTCTAGTATTACAATAATGCTATAGGTGAGATACGACCGGTACATAATTCCGAA
AAGTATTCTGTCCCCAATAAAATATAAACATTTTAGAAACTCAGTCTAAAAAAATAAAAA
TAGTATTATGATTGATGTATTATAAAAAAATCGAAAATTAATACGATACCATCAGATATG
TATGGTAATACGATTTGCAACTTTCCATAAATGCTTTCAGCCTTCAAGCAGATGCGAAAC
TCATTGCATCTAGCTATCAGACAGCGCCTAGTTTAATAAATAATCAAGATTGATAGAAGA
ACTAGAGCACTTTGTAATTTAAAACGATATTTTGACAGCTAATAGCTCTGGAGCTCTTGA
TTAATATACAAACATACAAGAACCAATATAAGGTCTTACAGTTTTTTAAATAATAAAAAA
AAAACAGCTATTAAGTCATACGTTTTAAATTAAGTAAATAAAACCATGAAATGTTCCTTT
GTGTAGGAATGTTTGTTATTTTTGATTGAATTTTATAGGCAAGAAATATCCATGAAAATA
AGTAATGGTGAAAAAATGTTGTAAAATGACAAATATTAATGTTTTAAAGATGAAAGGAAG
AGAGTAGCAGTAATGACATGAAACGTTTTATGTTATTTGGTTTCAAATTTCTAACTTTTC
ATATCTGGACGTATTTTAAATTTATTTTAATTTTAGATCTCATTAAAAACTGATTATATG
AAGTAGAATGTATAAAAACCCATTTAGAAAAGTCAAATTTCATTTTGTAAGCTTTTGCGT
TTCGACAACTATAGATTAATTTAAAAAGTATCCCCTTTAACTCTACCAATATGATACAAT
TTGGTGTTTTTTTGTAAATGAATAACACATTAAGCGCCTGATGCGGTCATTCTGTATTTG
TACATATATTGATCTACAGTGGATTTGATGAAATCATATTGATGATATTTAGACCAAAAA
GAACAGGAGACTCGAGTGTCGCATTAATCAATGCTTGTAAGGGTCTCCGACGTTAAGGTG
TGAAACACTAATAATATCGCGTGTTTATGAAATTTAACTGATTAGCTG
(4848 bp)

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