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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c29730_g1_i3
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		chromodomain-helicase-DNA-binding_protein_1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0004386 F helicase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005694 C chromosome
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008026 F helicase activity
GO:0016568 P chromatin organization
GO:0016787 F hydrolase activity
Transcript
Level		FPKM:11.86 TPM:9.09
ORF EntryO_BomoASG17124_complete:A_BomoASG_c29730_g1_i3
Sequence
(Nucleotide)
CGTGTGCTCTTCCGATCTGTTTCACTGGCAGTGCGCGGTGCTCGTTTCGTTTCTCGTATA
GGATTGGTGTTCTTGACGGCTCAAAGTTTCATTTTTTATTTTTTGTGGTTATTCTCTTTC
TTTACTTCAATTTGTTAACGAATATTACCAAAATTAAAGTTATTTCATTCTTGTAGTCAT
CAGAACTTACTCGTCGACAAAATGGCGTCGCTTCACAAGATTTTGCAGCCAAATGATTTT
GTTCAATTTTTCACTCTTTCATGAAAATATGATTAAAATTTATTTGTTCAGTATATTAAT
AAGATTTTTTTCAATGAAATGTTTTAAGAAAATCGGTTTTGAGCCAATATTATACGAGTA
ACAGTGAATTTCTTAAATAATCACCAAAATGCACCTGAAGGGTTCCATAAATGAATCTGA
AAGTGATTCCACAAGTGAAAAAGGAGATAAAAGTGACTCCAGCGAATCAGGCTCTGGAAG
CGAAAGTGAAAGTGGCTCTAGTTCCTCAGGTTCAGGATCACACAGATCTGCATCAGAAAA
ATCTGGTGTAGGGGGTTCACATCATAGTGATGATAGCAAAACATCACATAACTATGATAA
TGCGAATTCATCAAAATCTGACCATCATACTGATAAAAATAGTTCTGATGAAGACTCAGC
ACCAAAGTCTAGATCTAGAAATAGCCATAGCAAAGTAAAATCTGATCTTTGGGAAGAAAA
TCCAGATATATATGGAATCAGAAGATCAGCACGGCCAAGAAAAGAGCCAGATAGATTAAA
ATTAGCAGATAGTGATTCTAGTGAAAGAGATAGAACTCACAGTCGGAAAAGTAGAAAAAA
AAGCAACTCATGGAATTCTGATACATCAGAAAGTGACAGTGAAATAGGGGGCTCTCCACC
ACCACCATCAAAGAGACCTGGCCAAAGAAGTCTACCTCTGAGGAAAAAGAAACCGAGTAG
GAGAAGAAGGTATTCTAGTGACGAAGAAGAGAGTTCAGAGGGTACAGATGATGAAAGCAA
GAGTCGAACAACAACAAGACGTACAGGCGCAGCAGTTAGTTATAAAGAAGCAAGTGATGA
ACAAACTGATTCTTCTGATCTTTTGGAGGTGGAAGGTGTGGAAGGAGATGGTGAAGCTGA
GCCAGAACCTGAGGATCATAGTGAGACAATAGAACGAGTTCTGGGAATGCGACGAGGGAA
AAAAGGAGTCACTGGCAATGTGACCACCATTTATTATATAGAAGAACATGGAGACCCTAA
TGAAGGTTGTGACCCTAATGATGAAGACTCTACTGAACCTCAATACCTGATAAAGTGGAA
AGGATGGTCACATATTCACAACACATGGGAATCTGAAAAGACAATTAATGATCAAAAAGT
TAAAGGCTTAAAGAAACTGGAAAACTTTATTAAGAAAGAAGTAGAAATCTCATGGTGGAG
ACAGCAAGCTGGACCTGAGGATATAGATTACTATGAGTGTCAGTCTGAACTACAGCAAGA
ATTAGTTAAAACCTACAATAACGTTGAAAGGATAATAGCTGAACAAAATCGTGAGCTAGA
AGGTGGTGGAACTGCTCATGAATATTTTTGCAAATGGGAATCTCTTCCATATGCTGATGC
AACATGGGAAGATGCAGTTTTAATAGAGAAAAGATGGCCTGTTGAGGTGGAGCACTTTAA
AAGTCGAGAAGCTGCTAAAAGTACTCCATCTAGGCATTGCCCTGTATTGAAAAGGCGACC
CAAGTTTCATCAGATAAAAGAACAACCTGAATACGTGGGAAAAGATTCAAGTTACCACTT
GAGAGATTATCAAATGGATGGATTGAATTGGTTAATTCACTCATGGTGTAAAGACAATTC
AGTAATTTTAGCAGATGAAATGGGCCTAGGCAAAACGATACAGACAATTTGTTTTTTATA
CTATCTCTTCAAGTCGCAACATCTGTATGGACCATTTCTTTGTGTAGTGCCTCTGAGTAC
AATGACTGCCTGGCAAAGGGAATTTCAGCAGTGGGCACCCGACATTAATGTTGTTACTTA
TATTGGTGATGTTAGTAGCAGAGATATAATTAGGCAGTTTGAGTGGAGCTTTTCTAGCTC
AAAAAGACTGAAATTTAACGCAATATTAACCACATATGAGATTTTGTTAAAAGACAGACA
GTTTTTAAGGTCTTTTAGTTGGGCTTGCTTGCTTGTAGATGAGGCTCATAGGTTAAAAAA
CGATGACTCTCTACTATATAAGGCCTTAAAAGAATTTGATACCAATCATAGATTATTAGT
TACTGGTACACCTTTACAAAACTCACTGAAAGAATTGTGGGCCCTTTTACATTTTATAAT
GCCTTACAAGTTTGAGTCTTGGGAAGACTTTGAAAAAGATCATGAAGATGCTGCTACCAA
AGGATACGAAAAATTACACAAACAGTTAGAACCGTTTATATTAAGGAGGCAGAAAAAAGA
TGTAGAAAAATCATTACCTGCCAAAGTGGAACAAATATTAAGGGTGGAAATGACATCTAT
ACAAAAACAATACTACAAATGGATATTAACAAAAAACTATAGTGCACTTAGAAAAGGCGT
AAAAGGTTCAATTAACACATTTATCAATATTGTTATTGAACTAAAAAAATGTTGCAACCA
TGCATTATTGACAAAGCCAGAAGATTTCGAGTCTAGAGCTTCTCTTGCTACTTCGGATGC
TGTTGAGAAACTTCTTAGGGGCTCAGGAAAATTACTTTTGCTAGATAAACTGCTGTGCAG
GTTAAAGGAGACTGGTCATAGGGTTTTAATCTTTTCTCAAATGGTCCGAATGTTAGACAT
TTTAGCAGAATATTTACAAAGGAGACATTTTCCTTTTCAACGTCTTGATGGAAGCATTAA
AGGTGAATTGAGAAAACAAGCACTTGATCATTTTAACGCTGAAGGTTCGCAAGACTTCTG
TTTTTTGTTGTCTACTCGTGCTGGTGGGTTAGGTATTAACCTTGCCACTGCAGATACTGT
GATAATATTTGACTCAGACTGGAATCCTCAAAATGATTTGCAAGCACAAGCACGAGCACA
TCGTATTGGTCAAAAAAATCAGGTTAATATTTATAGGTTAGTGACTGCAAGGTCTGTTGA
AGAAGATATTGTAGAGAGAGCAAAAAGAAAAATGGTTTTAGACCACCTGGTAATTCAAAG
AATGGATACTACTGGAAAAACTGTGCTGAACAAACGGGATGCTTCAGGGACCACAGCCAA
TAATCCATTCAATAAAGAAGATTTAAATGCTATTTTAAAATTTGGTGCTGAAGAGCTTTT
TAAAGATGATGAAGAAAATGATGAAGACCCAGTTTGTGACATTGATGAAATTTTGCAAAG
GGCTGAAACCCGGGATGAAGGTCCTGCAATGGTGGGTGATGAGTTACTGTCAGCTTTTAA
GGTGGCTAGTTTTACTTTTGATGAAGAGAAAGCTGTCAATGAACTGAAGAAAGATAATGC
TGATGAAGAACCTAAAGACTGGGATGACATCATCCCTGAAAATGTTCGGAAAACAATAGC
AGAAGCAGAAAAATTAAAAGAAATGGAAGATATTTATTTGCCACCTCGAAGAAAAAATCA
ACTACAAAATAATGCTGATGGTGGTAGAAGACGTCGCGGTCGTTCTGGTGATGGTGGCGA
TGGCGATGGTGTTGATGGTGACGGTGAGGCTGAAAGCGATGCATCTGATGGTGAAGCCAG
TGCTGATGATGATCGACCGAGAAAAAGAGGTCGTCCTCCTGCTTCACATCGGGAGAAAAT
CAAAGGCTTCACAGATCAAGAGATAAGACGTTTTGTGAAAAGCTATAAGAAATTTTCCGC
GCCACTGAAGCATCTCGACAGTATAGCGTGTGATGCCGAATTACAAGAAAAACCATTAGC
TGAGCTAAAAAGACTGGGTGAAATACTGCAGGAAAGATGTAAAGCTGTACTTAGTGAGAC
AGCAGAACCAAGTGAACAAAATGAAGGCCGTAAAAACAACAGGAAGACATTTAAACTCGG
AGGAGTACCTGTAAATGCGAAAACCCTAGCTGCATGTCAAGATGAGTTGGCAGCTTTGGA
TGACTTTCTGCCACAAACTAAAGAAGAACGTCTCAAGTGGCAACTAGATTTTAGGACGAG
ACCAGCGAATTTTGATGTTGAGTGGAATGTCTCGGACGATTCAAAATTACTAGCAGGAAT
ATACCAATATGGTCTGGGATCATGGGAAGCAATAAAAATGGATTCTTCTTTCGAAATAGG
AGATAAAATATTAACGAATGAGGATAAAAAACCTCAAGCAAAACACCTACAGTCGCGAGC
AGAGTACTTATTAAAGCTTATTAAAAAGTTACTGGATCAAAAGAATGGAAAACAAAAAAT
GAAAAAACCTCGACCGAAGAGGGCAAATAAAGAACCGGTCACCAAAGATATTGTCGAAGA
TGACGGTAGCTCAGCTGAAGATAAAAAAACTAAAGGTGTTAAAAATGATAAAACTGAAAA
GGGTAAATTAAAAATTGAAGAAGTTTCTACACATGATGAAACTTCTAACGATAAGAAAGA
AAAAGACAAAAAACGTAAAAAAGACGAAGACCGCAAGGGTGACAAATCTAAAGGACGGAA
GAAACCACGACAAAGAGGAAATGAAGGAATACCAGGTCCCATGCATTTTACTGCCAACAA
TGAACCAAGGGCCTTGGAAGTCTTAGGAGATTTAGATCCATCAGTTTTTGAAGAGTGCAA
AGAAAAAATGAGACCAGTTAAAAAGGCTCTAAAGGCTCTCGACAATCCAGACCAATCTTT
ATCGGAAACTGAACAAGTGTCAAGAACCAGGGCCTGCCTCACCCAGATAGGTACTCAAAT
AGATTTGTGTGTTGAAGCATATCCAGATTCTCAAAAAGTAGAATGGAGAAGTAATCTCTG
GTACTTCGTTTCAAAATTCACTAACTTTGATGCAAAGCAGTTGTACAAGTTGTACAAGTA
TGGCCTAAAGAAAAATGAAGCTTCAAAGCAAAAAGATGGGAAGCATAAAGAAAATGTCAA
GACAAATAATCGTAATAATCATAACTCCATAAACCATTTAAAATCATTCAAGAAAAATTC
AAATTCAAAGCAAAAAAGTGATACAAATGATAAAAAAGAAAAGAAAATGAAGCTAGAAAA
GGAGAAAACTGATAAGCACGATAAAAACCAGCATACATCAGGGGTCAAGAGAAAACTAGA
AGATGGAGAATGTGACCCAGAACCCAATGATAATAAACGCCACGAAAGAGAACGGAGTCG
GTCGGAACGAGAGAGGGATCGTGATCGAGAAAGGGACAGGGATCGTGACCGAGAACGCGA
TCGAGATCGCGAAAGGGACCGAGACCGTTCGCGGACACGGCGGGACAGCGGCGGCGCGGG
GGGGCCGCGGGCTCGGCCTTATGTGGCACAGCACGCGCACGTCGAGCACCCCTCGCACCC
TGCACACCCCGCCTGGACCCCGCCGCCCTATCCCGGGCCCCGACAGTACCGCGGAGACCG
CAATCAGAGACAACACGATAAAAGAAGTAGGTATGGATTCAGTGGCATGGCAGGTCCATA
CGGTGGCTATTATGATAGCACAACAACCATGGCTAGTGGTATGGGTTTTCCGCCTGTGAG
GCCTTACGCAGACGACTGGAGAGGATATTCACAGCCTGAATATGGCTACGATGATCGGGA
GTACGAGCGTGAAGTTTATAGAAGAGATTACGATAGACGCGCACCACCAACATGAGGATA
GTGCGTTATTTGCCGATAATTTGTAAATAATATATGTAAATAGTCCGTAGTTATTTCTTT
GGACATCGGTTTAGCCGTTGCTTAAAGTGTAAGTGACATGTGCTGTGTTTTTTATCTATG
TGATAAGCGAAGCGCTGGTTCAGAACTGATTAATAAATAAATAAATAGTGTTTATGTGAG
ACTGTACAGTAAATTTATTTATTGTCGTATCAGTCGATTGTTTTTGTACATATTTTAGAC
AATTACCAATAATTTTAAATTAATTTCTAATGTGTCGCCAATTTTACGGTTTAAGTATTT
TGTGT
(6065 bp)

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