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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c29712_g1_i4
Scaffold_idBomo_Chr26
NCBI non-redundant
(nr)		uncharacterized_protein_LOC101742999_[Bombyx_mori]
Ontology
GO:0000790 C chromatin
GO:0002039 F p53 binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006417 P regulation of translation
GO:0006915 P apoptotic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007599 P hemostasis
GO:0007611 P learning or memory
GO:0007626 P locomotory behavior
GO:0008270 F zinc ion binding
GO:0008298 P intracellular mRNA localization
GO:0010609 P mRNA localization resulting in posttranscriptional regulation of gene expression
GO:0030220 P platelet formation
GO:0030425 C dendrite
GO:0035855 P megakaryocyte development
GO:0042995 C cell projection
GO:0043025 C neuronal cell body
GO:0044822 F RNA binding
GO:0045600 P positive regulation of fat cell differentiation
GO:0046872 F metal ion binding
GO:0070889 P platelet alpha granule organization
GO:0072332 P intrinsic apoptotic signaling pathway by p53 class mediator
GO:1902164 P positive regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator
GO:1902166 P negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
GO:2000765 P regulation of cytoplasmic translation
Transcript
Level		FPKM:2.57 TPM:1.97
ORF EntryO_BomoASG17077_5prime_partial:A_BomoASG_c29712_g1_i4
Sequence
(Nucleotide)
GTTCTTCTAAATATTTCAAGAATTATATTTTGTGTGGAATAGTAGATTTTCATTGTCTAC
TGTGCAAAGAAACTTTTAATTCCATTACAGATGTTGACAAACATTTGAGATGGGAGAAGC
ACAGGAAGATACTAAAAACCCAAACATATCTGCATAAATTTAAAAAAGACTACATTTCAA
AGGTTCCCAATTACTACTATTGTGAAGTCTGTAATTCAACAATAATGGACATTAAAGATA
TTCCAGACCATATTAATAAAGAAGCACACAGAAATAACAAATTGAATCCTGATATTATAA
AAGAAAAACCAAAAGGATACTATGCGATTGGTAGAGTTGTTTTAAAAGATAAAAAAATAT
CAGAATATATTTGGAATGGAATTGTAAATAACAAATGTGTGATTTGTGATGTTACTTTAG
ATGATGATATGATCAAACATTGTACATTACCTGACCATATTGTTAAACTGATTGAAACTG
AAGTTGATTTTCAAAATGAACAGGGCTATAGGAAGGTAAATTTGGAATGCTATCATTGTT
TCATGTGCAACCAATTATTTAATCCTGAAACATTTTTTGAACACTACTGTTGCAAACCAG
AAAAAACTGTTGCAACTGTAACTAATAAGTGTAAAACCACTGGAAGAAAACTATTGAATT
TAATAGCCCAAGCAAATAAAGCACCCAGAGTAAAATCAAATTTAGGCGATATTGTTGAAG
AGGAATCATCTGTGATGTGTGAAGTTTGCAATGAAGAAATACCTTATGATTTTGAGGTAT
TCTTTAACCACATGCAGAGACATAATTATGAAGCAAGTCAAATGAACCTTATACAGATAG
CTGATACTGAACGGCAGGTAATTGACCACGGAAAACTTAGGTCTGAACTGGCAGCATATG
GAAGGGAACATTCTATCAAATTAAATGCAGGTGGTAGCAAAGGATTTTGCGTTCTTTGCA
GTGCGTTTTTGTCAGCACACTTAAAAGTATTCAAATCTCACGTTGAGGGTGCAATACATA
CTGGCCATTTAGAAATAAAAAACCACAAAAGCACAAAAAAATCAGATAATAAGTACCCTA
CTTTGAACAAATTTATAAAATTTATGCTGTATTACAAAGATTTAAAGTCATTTTACATAA
ATACGAGCATCAGTGTGAAGAATGACAGTTTTATGCTGATGAACAAGATTGAACATGGTC
CTCATTATAAAAAGACCAAATGTTATGCATGTGATGTGTCTATGGCATTGGGTACTGAAT
ACCTACATTGTAGAACAGAAGAGCATAAGAAAAATGTCATGTCTAGTACAGTAATCCTTC
ATGAAGATAACAATTTTGTAAGAGAGATCAGACCAAACTTGTATCACTGTGGTTGTTGCA
ATTTAACATTTCCATTCATAAATATTTTGAAGAGGCACATCACATCTTTTAGTCACCTGG
CAAAAATACGAGAATGCAATATTGCCAATCTATTGATAATTTTCCTCAAGAAATATGGAG
TCCCTGCATATTCTGAACAACTCGCTATAAGCTCTAATATAGATAATTTATATATTCAAA
TTATGAAGTCAGTTTATGGAAAACACATCATTTAATACTATTCTAAATTTGATCTTGTTT
TCTTGAAGTGTTATTATTAATATTCGATTAAAGTTCAATTCTTATTATTTTGTAAAATAG
TAATGAGAAAAGATTCTAGGCCATGGG
(1707 bp)

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