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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c29695_g1_i3
Scaffold_idBomo_Chr22
NCBI non-redundant
(nr)		PREDICTED:_polypyrimidine_tract-binding_protein_1_isoform_X2_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006376 P mRNA splice site selection
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0021510 P spinal cord development
GO:0021549 P cerebellum development
GO:0030426 C growth cone
GO:0033119 P negative regulation of RNA splicing
GO:0036002 F pre-mRNA binding
GO:0043025 C neuronal cell body
GO:0044822 F RNA binding
GO:2000177 P regulation of neural precursor cell proliferation
Transcript
Level		FPKM:8.06 TPM:6.19
ORF EntryO_BomoASG17039_complete:A_BomoASG_c29695_g1_i3
Sequence
(Nucleotide)
CACCGCTCAGCAGGAGTGTCGGACGCTCGGCTTCGCAGTCGCCGACTTTAGTATTCTTCG
TTTCTTTTCTTTTTCTATTCGTTTAATTTGTCACTCGAACTTCGTGCCACTTTAAACATG
TTATCCTTCATCGAAACAGAGTGAATTCGTGTGTTACTGTGTTTACGTTTTGACTGTGTC
ACGTGTGGAATCAAATCGTACCGGTTTTCGGAGTTTTTAAGTGTTTAAAAAACGCATACG
GCCTTCATTTACGTTAGGAGAGCCGGTTGATCGTCAAATTGTGCTTCCTAAGTGATTAAA
CGGAAACGAGACCCGTGGGAACCTGTTTGTCTCAAAGTTTAAAAGTTGAGGAAAAGGCGG
GCTTTTGAAAAGTTTTCTCGAGTTGTTCCAACTGGATTCTTCTGGGAAGTTTGTGCTTCT
GCGTGTACCGGTGTTTCAGTGGAAGTGCTCAAAACTTAAACATAACCTATTTTCAAAGTG
GGCGCGTGTTGGACGGGCATGCGCACTTGGGGTCATTGAAATTATTAATAAGCAGCCCGT
AATTTGATAAACAAACCGTGACAGTGTTGTTGTAAGTGTAGTGCTGCGCTGCTAACAAGG
AGTGCACGAGTGTTACAGTCGTCCGATTTTCGAGCTTTTAATTTAAGTTTTCAAACGGCT
GGTACCGTTCACCTGTGGGATTCCTGTGTTTTACCTGCGCGCGCACTGATTTCTCTATAA
AGGTTGGCGCAACTATGATGTCCTGTCCTTTGCCACTGCCGCTGTTGCCGGCGTTACATC
CGCAACCAGCATTAGCTTCAGACTTCCCGATCCACATTGGAATAAAGAGAGGCTCCGACG
AGCTTCTTTCGCAGAGTGGCGTCACCGTCATGGCGCCCGCCGCTCCGCACCATGCCGACA
ATAACAATCAGGACTCTGCTGCCAAGAAGGTGAAACTGGAACAAAATGTCGGCAAGCCGT
CTCGAGTCATTCACATACGGAACATACCGAACGAGACGACGGAAGCGGAGATCATACAAC
TCGGATTGCCCTTCGGAAGAGTCACCAACGTTCTAGTGCTCAAAGGCAAAAATCAGGCGT
TCCTTGAAATGGCAGAGGAGATATCTGCGGTGGCTATGGTCGCATACTTCGGAGGATGTG
TAGCGCAGTTGCGTGGCCGAGCGGTTTACGTTCAGTTCTCCAACCACAAGGAGCTAAAAA
CCGATCAGACGCACAGCAATGCCTCAGCATCGGCGCAAGCGGCTTTACAGGCGGCACAAG
TCATATCGAATAGCGCTGGTGCGGCCATTGTTGCGGGCGGCGGTAACGCTTTGCAACCAG
CTAATGGCGGTACAGAAATACAGGGCGGTCCCAATACAGTACTGCGTGTCATCATAGAGC
ATATGTTATATCCCATCGTTCTGGACGTCCTCTACTCGATCTTCCAACGCTACGGCAAGG
TGCTCAAGATTGTAACTTTCACTAAAAACAATTCATTCCAAGCTCTCATTCAGTATCCAG
ACACGGTGTCGGCGCAAACAGCAAAAACGGCGCTCGACGGGCAGAATATCTACAACGGGT
GCTGCACACTCCGCATCGACTATTCGAAGATGACTTGCCTGAACGTGAAATACAACAATG
ACAAGTCGCGGGACTACACGAATCCGACGCTTCCCTCCGGAGACGGCGACGCTCATCAGC
TGTTGACCAGCGGAGGTGTATTGGCGCCTCAGTTCCTGGGCTTGGGTTCGGGATTGGCTT
CGCCGTATGGTGTGGGTGTCGGTGGAGTGGGGCTCCCAGCCTTCGGAGCTCTCACTCTCA
CACCGGCCTCGCCCGCTCTGCGAGCCCTTGCTGCGCCACCTTTACCATTAGCCACAGTCC
TACTGGTGTCTAACCTGAACGAAGAGATGGTCACGCCTGACGCTCTCTTTACCCTTTTCG
GCGTGTATGGTGACGTGCAACGGGTGAAGATACTTTACAACAAGAAGGATTCGGCTTTGA
TTCAGATGGCAGAACCGCACCAGGCCCATCTAGCCCTGACCCACATGGACAAGTTACGCG
TGTTCGGCAAGGCGATGCGCGTTATGCTAAGTAAGCACCAGACTGTTCAGCTCCCTAAAG
AAGGACAACCTGACGCTGGTCTTACCAGGGACTACTCGCAGAGCCCACTCCACAGATTCA
AGAAACCTGGTAGCAAAAATTACCAGAACATCTACCCGCCAAGCGCCACTCTGCATCTGT
CGAACATTCCAGCCACCGTGACTGAAGAGGATATCAAAGATGCATTCTCCAAACGGGGAT
TCACAATTAAGGCTTTTAAATTTTTCCCGAAGGACCGCAAAATGGCTCTGGTCCAACTGT
CGTCCATCGACGACGCAGTGACCGCGCTCATCAAGATGCACAACTACCAGCTCTCGGAAT
CCAATCACCTCAGGGTGTCTTTCTCCAAATCAAGCATCTAAACGGATTCGACCGGACTAT
CACACTGAATATCACACAATACTTGGCAGTCGCGTCCGTTCTATTGGATCTAAACTATAA
TTGAAGATTCTTACGGTACTGTTTGTCATAATTATTTTAGATTGTGTCGACGGAGACTCG
TGTTCCAGTAACGCATATCAATTCGATGCGACTGTCAATTACATCTCACCTCTCATAAAA
ATCGAGAATTTTCGCTCGACTGAAAATTTTATATATGTATGTATTACGCTTACTCGGATC
AGTCTATAGATTAAGTGCTATTCTATTTTCTTATATGAATAACATTTAACTGTTACAATA
TAATTAAATCTAAGATGAATCGTCACATGAACATTAAGCCGAATCATGCTTGTTTTATCA
GAATAGTATCTAACTTCCATAACCGTTGTTACACAAGAG
(2859 bp)

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