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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c29695_g1_i1
Scaffold_idBomo_Chr22
NCBI non-redundant
(nr)		polypyrimidine_tract-binding_protein_2_isoform_X2_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0005634 C nucleus
GO:0005681 C spliceosomal complex
GO:0006376 P mRNA splice site selection
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0021510 P spinal cord development
GO:0021549 P cerebellum development
GO:0030426 C growth cone
GO:0033119 P negative regulation of RNA splicing
GO:0036002 F pre-mRNA binding
GO:0043025 C neuronal cell body
GO:0044822 F RNA binding
GO:2000177 P regulation of neural precursor cell proliferation
Transcript
Level		FPKM:0.86 TPM:0.66
ORF EntryO_BomoASG17037_5prime_partial:A_BomoASG_c29695_g1_i1
Sequence
(Nucleotide)
TGTGCTCTTCCGATCTGGTGTATTGGCGCCTCAGTTCCTGGGCTTGGGTTCGGGATTGGC
TTCGCCGTATGGTGTGGGTGTCGGTGGAGTGGGGCTCCCAGCCTTCGGAGCTCTCACTCT
CACACCGGCCTCGCCCGCTCTGCGAGCCCTTGCTGCGCCACCTTTACCATTAGCCACAGT
CCTACTGGTGTCTAACCTGAACGAAGAGATGGTCACGCCTGACGCTCTCTTTACCCTTTT
CGGCGTGTATGGTGACGTGCAACGGGTGAAGATACTTTACAACAAGAAGGATTCGGCTTT
GATTCAGATGGCAGAACCGCACCAGGCCCATCTAGCCCTGACCCACATGGACAAGTTACG
CGTGTTCGGCAAGGCGATGCGCGTTATGCTAAGTAAGCACCAGACTGTTCAGCTCCCTAA
AGAAGGACAACCTGACGCTGGTCTTACCAGGGACTACTCGCAGAGCCCACTCCACAGATT
CAAGAAACCTGGTAGCAAAAATTACCAGAACATCTACCCGCCAAGCGCCACTCTGCATCT
GTCGAACATTCCAGCCACCGTGACTGAAGAGGATATCAAAGATGCATTCTCCAAACGGGG
ATTCACAATTAAGGCTTTTAAATTTTTCCCGAAGGACCGCAAAATGGCTCTGGTCCAACT
GTCGTCCATCGACGACGCAGTGACCGCGCTCATCAAGATGCACAACTACCAGCTCTCGGA
ATCCAATCACCTCAGGGTGTCTTTCTCCAAATCAAGCATCTAAACGGATTCGACCGGACT
ATCACACTGAATATCACACAATACTTGGCAGTCGCGTCCGTTCTATTGGATCTAAACTAT
AATTGAAGATTCTTACGGTACTGTTTGTCATAATTATTTTAGATTGTGTCGACGGAGACT
CGTGTTCCAGTAACGCATATCAATTCGATGCGACTGTCAATTACATCTCACCTCTCATAA
AAATCGAGAATTTTCGCTCGACTGAAAATTTTATATATGTATGTATTACGCTTACTCGGA
TCAGTCTATAGATTAAGTGCTATTCTATTTTCTTATATGAATAACATTTAACTGTTACAA
TATAATTAAATCTAAGATGAATCGTCACATGAACATTAAGCCGAATCATGCTTGTTTTAT
CAGAATAGTATCTAACTTCCATAACCGTTGTTACACAAGAG
(1181 bp)

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