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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c29686_g1_i2
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		LOW_QUALITY_PROTEIN:_regulator_of_nonsense_transcripts_2_[Bombyx_mori]
Ontology
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0001889 P liver development
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006406 P mRNA export from nucleus
GO:0031100 P animal organ regeneration
GO:0035145 C exon-exon junction complex
GO:0042162 F telomeric DNA binding
GO:0048471 C perinuclear region of cytoplasm
Transcript
Level		FPKM:2.60 TPM:1.99
ORF EntryO_BomoASG17021_5prime_partial:A_BomoASG_c29686_g1_i2
Sequence
(Nucleotide)
TGCTCTTCCGATCTCATGATTTTAAGCATCACCATATTGAGATGGCTTGCAATCTGCTTG
AAACGTGTGGTAGATATTTATACTGTAATCCAGATACACACCAAAGGACTATGATATATT
TACAGCAAATGATGCGAAAAAAAACTGTTTCAGCTCTAGATTCGCGATATGTAACACAGA
TAGAAAACGCATTCTATTACGTTTGCCCTCCCGAAACTCCTGTTCAGCCTAAAGAAGAAG
AGCCACCACTTCATCAATTTATCAGAAAAATACTTCATGAAGACTTGCAGAAAAGTAATG
AGGAAAAAATTCTTAGACTAATGCGAAAACTGAATTGGGATGACCCAGAGGTATCCGCCA
TTGCCATACAACATCTCGCAGGAGGTTGGAGGGTAAGAGCAAGTGCCAGAAGGGCTCTGG
CCAGACTGACAGCTGAACTGGCAATCTGGCAAGAAGTAGTAGCTCCAGCAGTCGTTGACA
CAATATTAGAAGAAATAAGGGTAACAATGGAAGACCCACATCCAAGATATAATCAAAGAA
GGATAGCTACTGTTCGGTATCTCGGAGAACTCTATAATTATAAATTATTAGATTCTCGAG
ATGTTTTCACTGTTTTATATTCATTTATAACATTTGGTGTCACCAATGATCACAGCAGTG
TATCTGTATTGGACCCATCTGATAATGTTTTTAGAATAAGACTAGTCTGCGCTCTGCTTG
AGACTTGTGGTGCATACTTCAACAGTGGTTCGAGCAAAAAAAGATTAGACTATTTTTTGA
CCTTCTTCCAAAATTACTATTGGTTCAAGTTCTCTGATCCGATATGGACAAAAGACTATC
AATTCCCTATTTACGTTAAATATATTTATCAAGAATGCCTGACGACTTTACGCCCTAAGT
TGACTTTGTTTACGAGCTGGCAACAGTGTAAGGATGCAATAGATGAACTACGACAGACTT
TATATCCGGAGCTAGGAGAGGAAGAGTACGATAATGAGGATCAAGGTGATGATAGTGTGA
ACGACGGCTTAGACACAATCATGGAAACGGATGATGAAACGGACAATCCGCAATTGCCTG
ATGAAAGCTCTGATGAAGAACCGATTACCGAAAATAATGTTAATGACGAAAACGAAATGC
AAGATGAAATGGCAATTGAGCCACGAAGACCTGCTACTAAACATGTAGAAGACGTTGAGT
TCGAATCGGCATTCGAGAAAATGGTAACAGAAAATATTGCAGAAAGACAACGGGAGAATA
GACCGCAACAACGCGACATTGCTGTCCCGATGACCTGCAGACAGACTACGAAGAAGACGT
ATGAACAGCTCTTGCAAGGAAAAGAGGGCGTGGAATTCGTTCTTATGGTTCGTAAAGGAA
CGAAACCACAATATAAATCGTTCAGTGCTCCACCGGAATTGGCCAGCAATCTACAACAAC
AAGCTTTAGCTGATAAACAAGAAATGGAACGAGTTAAACGACTTACTCTAAATATATCGG
AAAGACAAGAAGAAGAAGAATATAGCGCAGAGAGCGGTGGTGGATCGGGAGGTATCGGTA
ATCCTAACAGAGGTCAGCATGTTCGTCAGAAATACCAACATCCCAAAGGGGCACCGGACG
CCGATCTCATATTCGGTCCTAAGAAATTTAAATAAATAAAAAACTAATGTATGTAATGTA
TTGTAATAATATATGTAATAAAAAAAAAA
(1709 bp)

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