SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c29661_g2_i2
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		transcriptional_repressor_CTCF_[Bombyx_mori]
Ontology
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
Transcript
Level		FPKM:20.44 TPM:15.68
ORF EntryO_BomoASG16950_complete:A_BomoASG_c29661_g2_i2
Sequence
(Nucleotide)
TTTTCGTAAAAAGGGGTACAAAGTGTTTGCTTCACGTATTATTAATATATATTGTTGTTG
TTGACAGTCTATTAGCGATGCTGCTGAAGATGTGCTGATGAGCAACGAATCCGAACAATA
CCAGACCGTGACTCTTGTTCCGTCAGAGAACAGCGGCGGTGAAGTCAGCTACGTCCTCGT
GGTGCAAGAAGAGACTAAACCTATCAACCTTGATATTAAAGTCGATCAGGATGAAGAAAA
GGTCTCCGAAGACGTGTATAACTTTGAAGAGGAGGAGATTGAGGCAGACGTTACCGACGA
AGAAGACGAAAGCGAAGCAAAGAAAGCTCAACCGCAGACGAAGAAGGGAAAGTTCTTACG
TCCATGTTTCACGTGCAATTTTTGTTCGTATTCAAGCCACAGGCGATATCTGCTTCTTCG
CCACATGAAATCTCACTCTGAAGATCGTCCCCATAAGTGTGGTGTGTGCGAGCGCGGCTT
CAAGACAATTGCATCGCTTCAGAACCATCTCAATATGCATAATGGAGTGAAACCTCATGT
TTGCAAATTTTGCAACAGCCCCTTTACTACCTCAGGCGAGCTGGTCCGTCATGTACGCTA
TAAGCACACACACGAAAAACCTCACAAATGTACGGAGTGCGACTACGCTTCGGTCGAACT
TTCGAAGCTGCGTAGGCACGTGCGTTGTCATACTGGAGAGAGACCTTACCAGTGTCCACA
CTGCACGTACGCTTCACCGGACACTTTCAAGCTGAAACGCCATCTCCGTACTCACACTGG
TGAAAAACCGTACAAATGTGAACACTGCAACATGTGCTTCACACAATCAAATTCTCTTAA
AGCTCATAAGCTTATTCATAATGTGTCTGAAAAGCCGGTCTACGCTTGTGAGTTGTGTCC
AACGAAGTGCGGCCGTAAGACTGATCTTCGGATTCATGTGCAGAAACTTCATACATCTGA
CAAGCCTCTCAAGTGCAAACGATGCGGGAAAACCTTCCCCGACCGTTATTCCTGCAAAAT
GCACAATAAGACTCACAATGGCGAGAAATGTTACAAGTGCGAATTATGCCCATATGCTTC
TACAACACTACGTCACCTCAAATCTCACATGCTCAAGCATACTGATGAAAAACCTTTTTC
TTGTGACCAATGCGATCAATCTTTCAGGCAAAAGCAATTGCTACGTCGTCATCAGAACTT
GTATCACAATCCTCACTATGTTGCCAAGCCACCAAAGGAGAAAACCCATTCTTGTCATGA
ATGTAAACGGAATTTTGCCCACAAAGGCAACTTGATTCGGCACCTGGCCACACACGATCC
AGAATCTGGCCACCAGGAAAAGTTGCTTGCTCTGAAAATGGGACGTGAAAAGAAAATAAA
GTACCTCAATGGACCAATAATCAAAGATAGTGAAAATGACGATCCTGATGTGATCCGTCT
TGGACTCGGGACGACCGGTCTGAATTCTAACGATCTGAAACGAGGCGAGCTGGTAACCGT
CGCTGACGGTGAAGGACAGCAGTATGTGGTGCTCGAGGTTATACAAATGGAAGATGGATC
CGAGCAACAAATTGCTGTTATAACCCCTGATTATCTTGAAGAGGAAGATGAAGCAGAAAT
GGAAAGTGTAGATTCTGATGATGACAAATCTTCTATAGCACAATCCAGCCAGAAAAGAAC
CAGGACCATTAAAGTAGAAAACGATGTGGATTCTTGCTTCGGTTTTGATGAAGAGGACGA
AGATGAGGAGGAGGGTGAGGATGAAATCGAAAATGAGGAATACAAGGAAGTGGTGCTGCG
CATAGTTTAAAACTATTTGTTACGGGTCTCCAACAGGAACGAAGCGTGCAGAGTCTCACG
CAGGTTTTGGGATCTGGCGCTAGAGCAGGCTTAGATCCGAATACTATAGTTTAATTAAAT
TTACGTC
(1927 bp)

- SilkBase 1999-2023 -