SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c29530_g1_i1
Scaffold_idBomo_Chr22
NCBI non-redundant
(nr)		DNA_N6-methyl_adenine_demethylase_isoform_X2_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0005634 C nucleus
GO:0007281 P germ cell development
GO:0008270 F zinc ion binding
GO:0016491 F oxidoreductase activity
GO:0035511 P oxidative DNA demethylation
GO:0035514 F DNA demethylase activity
GO:0035516 F oxidative DNA demethylase activity
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
GO:0051213 F dioxygenase activity
GO:0055114 P obsolete oxidation-reduction process
GO:1901537 P positive regulation of DNA demethylation
Transcript
Level		FPKM:9.33 TPM:7.15
ORF EntryO_BomoASG16612_5prime_partial:A_BomoASG_c29530_g1_i1
Sequence
(Nucleotide)
TCGCTAGCTTGTATGATATGATCGAGCTATCGCGGCCGCAAGCCACTCGGCGGCACAGCA
GGAGTTCCCGGAGCCCCAGGAGTAGCGGTCCCCGGTGTGGCGACCGCCGCGTCACCAAGT
CCCGCGCCGCAGACCCCAGCAGCGCCGAGCCCAGCGCCCGCCACCACGCCCGCCATGAAG
CAAGAGCACCCCAGCCAACCTATGGCACCGATGCCGTTCTACGCAGGCGACCCTAACAGA
TTCCCAACGACGTGGCAGACTGATCCGTCTCAAGGCTGGCAGAACCAGTTCATACAGCAG
CTTCCCACACAGACGGGTCAGACGACTTTGGATTACCAAGGAAACCACACTGCCTACGCA
ACCTCGCCCCACTATCAGGCTAACACCACGTACACCGTCCAGAATGTCGCTACAACGTTT
GACGTCACAAACAGCACGTATTATCAAGCGGGAGTACAGGCTGTCCCCGCGCAACGACCT
CCGTCGAACCGGGGTGCCTACACTCCGGTCCCCTCTCCGCGAGCACCTCACTACACCACA
GAGTACCAGCAACAATACGCGCAACAAGCATCTACGCCCGGCGCAACTTCAGGCACTGAT
TCGAGACCAGCCTCGGCCGCTTCTTACCAAAGTAACGCACCAACAGCGGCCACCCCGGTC
TATTCTGTCGGTCAAAACTATGAACGATCAGAGTACAGTACGGAGCATTCAGAGGAATAC
AATAATTCTGAGAGCGGCACAGGAGATACGAATAATGAAGTGGAAAGACAAGAACAGAAC
TCGACTAGTGGACAGCAGTCGGGAAACGCCGAGCCTGGATACCTGCAGGGGAGCAACGGT
CCGCGAGCTTCACTCGATTGTAGCGGGTATTCGGGCGCTTACAACAGCGGACAGTACAGG
GAAAACGGTCAAGTGCAAAATCAAAACGAATGGCAGCAACAGTGGCAACACAACCAAAGA
CTACAAAATCAACAAATCCAAAATCAACAGCAACAAATTCAGAATCAACAACAGATGCAA
AATCAACAACAATTACAAGCTCAGCAACAACTTCAGAGTCAGCAAATGCAAAACCAGCAA
CAACTTCAGAACCAACAGCACATGCAAAACCAACAACAGATTCAGAACCAGCAACAAATG
CAAAGCCAACAACAAATGCAGAACCAGCAACCT
(1173 bp)

- SilkBase 1999-2023 -