SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c29491_g2_i1
Scaffold_idBomo_Chr15
NCBI non-redundant
(nr)		E3_ubiquitin-protein_ligase_RNF13_[Bombyx_mori]
Ontology
GO:0000139 C Golgi membrane
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005637 C nuclear inner membrane
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005768 C endosome
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0005794 C Golgi apparatus
GO:0008270 F zinc ion binding
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016874 F ligase activity
GO:0031902 C late endosome membrane
GO:0046872 F metal ion binding
GO:0051865 P protein autoubiquitination
Transcript
Level		FPKM:23.38 TPM:17.93
ORF EntryO_BomoASG16543_complete:A_BomoASG_c29491_g2_i1
Sequence
(Nucleotide)
GAGTAAATGAGTGAAGTTATTCATTTCAGTCGTAGTTTAATTATCGAAATTAGGCTTTCA
TATCAACAATAAGCCTATTCTTGTTGTTAAGCTAGTTATAAAGCTGTAATTCTTAATACC
GAGTTTTCGTTATATTCCGCAAATGCAATTCTAAATTTACATTTTGCGACGGGATTATAA
AGTATTTTTAGTTTCTGTTTGTATGTAATATTTTCATCTTGTGCTTTGTGCGAACGACTA
TATTATTGTTGTCGTTACACACGTGATTCGAGGACGAGGCTTGTTTACACAAATCAAATT
AATTTAAATAAGTTAATTTATAATGAACATTTGTGAAATGATAGTTTATTGAATACTAAG
TGTGCTTTTGATTACGAAACATTTTATCAACACACTTCCTTTTGTGCCTAGAACAATGTC
CTCTCGTCGTCCGAAGACTTCAATAAGAGTATGATCGACGAATTCGGGGTGCAAGAATAA
CATGAACTGAACTAAAATGCTGTCCAGAGTCATAATAGTACTATGCGGCTTCTTCACGGC
GGTCTGCTGTAACATCATTGTTTACACGCAGACGATACCACATGCGATAATGGAGGAATT
CCGCGACATCCCGGCTAGTTTCGGCGAGGAACTGCCGCCGGAGGGTCTGCGCGGACTCCT
GGTCGAGGGCGTCCCGGCTGACGGATGCACGGCCCTGGATAAACCGCCCGTTGTCGACAG
CTTTACCGGGAAATGGATCGTACTCGTAGCCAGATACAACTGCAGCTTCGAAGTGAAGAT
ACGCAACGCGCAGGCGGCCGGCTTCGATTGCGCGATCGTGCACAACGTGAACTCGAGCGA
TTTGGAGAAAATGTCGGCTAAGAATCCGGAGGGCATCGTGATACCTTCAGTGTTCGTCAG
TGACGTGGCCGGCGACATACTGGCAGCGGAATACCAATATAATGCCGGTTTCTTTATAAT
GGTGAACGGCGACCTACCGTTCAACATCAACACGCACCTGCTGTTGCCCTTCGCAATAGT
GGTCGTGCTCTGTCTACTCGTCATATTTATATTTATGATAGTGAAATGTATAAAAGACAG
ACGCAGAGCCAGAAGGCACCGCTTACCGCATCGTGCGCTTTCGAAGATACCGACGTGCAA
GTTCAGCAAGGGCGACCCGTACGACACGTGCGCCATCTGCCTTGACGACTACCAGGAGGG
GGACCGCCTGCGCGTGCTGCCCTGCGCCCACGCTTACCACAGCGCGTGCATCGACCCGTG
GCTGACGCAGAACAAGCGCGTGTGTCCGGTGTGCAAGCGCCGCGTGGTGTCCGCCGGCGA
GCCCCGCCCCCGCCGCTCCTCCTCCTCCTCCGACTCCGACACCGAGCCGCTCCTGCCGCA
GCCGCGGGACCAGGGAGGAGGAACATTTGAAGAGCAACGCGAGAATCCTTTCGTGCGAGC
GGCGAGATTCATGTCGAGGTTGCGGGCTCGAAATAACCAGAATAGTGCTGATGCAGAGGT
CCCTCCTGAACTAGAAGATAGTCAAGAAACGTCTGATCAGGACGAATTGAACGGCAGTAC
CGAGGCGCAGCCCCTGCTGGAGGAGCGCGCCCCCCACTCCATCAACGGCTCCTCGCGCGG
GGAGATCGGGGTGGCGGCGCTGCCGGCTCCCGCCTACCACTCGCTGCCGCGGTACATCGA
CTTATGAGCCAGTACCCCTGCGCCGCACGACCCCCGCCCCCCGCACCGCC
(1730 bp)

- SilkBase 1999-2023 -