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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c29479_g1_i2
Scaffold_idBomo_Chr23
NCBI non-redundant
(nr)		pleiotropic_regulator_1_isoform_X1_[Bombyx_mori]
Ontology
GO:0000398 P mRNA splicing, via spliceosome
GO:0000974 C Prp19 complex
GO:0003674 F molecular_function
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005662 C DNA replication factor A complex
GO:0005681 C spliceosomal complex
GO:0005730 C nucleolus
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016607 C nuclear speck
GO:0031965 C nuclear membrane
GO:0034504 P protein localization to nucleus
GO:0071011 C precatalytic spliceosome
GO:0071013 C catalytic step 2 spliceosome
GO:0080008 C Cul4-RING E3 ubiquitin ligase complex
GO:1900087 P positive regulation of G1/S transition of mitotic cell cycle
Transcript
Level		FPKM:7.94 TPM:6.09
ORF EntryO_BomoASG16494_complete:A_BomoASG_c29479_g1_i2
Sequence
(Nucleotide)
ATTTTGTAGGAAAGTTGTTGCTGTTTGTTGTCGGGTATTTCTTGGTCTCGACACCGTTAA
AACCAAAAAGCTTTTCGTAAGAATCATAAGGAATATGCATTAATTAAAAATAAAATTGAA
TTTAAATGCTGATTTAATATTACAAGTTAATAGTATTTCGTATTCTTTAAGTAATTTTAG
ACATTAATTAATAACTTCATAATGTCTGAGGACGTGATTAAACATTCTGTACACACTTTA
GTGTTTCGATCGTTGAAAAGATCGCACGATATGTTCCTAGCTAATCAAGGAATGTTGCCG
CCAATCGACGATAAAGCAGAGAAAGTACTGAAATTGGTTAAAGCAAGAGATAGTTACGGA
CAAGTCATGGGTGCAGTGCGGAAGGCTCAGGCCCTGAAACAACAAGAGTCTGTCACCTGT
AGACCTGAAACTCCACTGACCACAGCAGAAACAGTGGAAACTGCACCTTTGCCGTCGGAA
GGGGCTGTTGTCCCATACTCTGGACCAACACCTTCACCGTCACCAGCTCCCCCCTCGGGG
GCTTTAACTGTACCACGGAAACCGCCGTCTATGCCCAAACCAAAATGGCACCCACCCTGG
AAATTAATGCGTGTTATATCAGGTCATCTGGGTTGGGTTCGATGTGTTGCTGTAGAACCT
GGAAATGAGTGGTTTGCTACCGGTGCCGCTGACAGAGTGATAAAAGTATGGGATTTAGCA
AGTGGGAAACTAAAAGTATCTCTCACTGGACATGTGAGTACAGTAAGAGGAGTGGTAGTG
TCACCAAGACATCCATATTTATTCAGCTGCGGTGAGGACAGACAGGTGAAGTGCTGGGAC
TTAGAATATAACAAAGTGATCCGGCAGTACCACGGTCACCTGTCGGCCGTGGTGTGTCTG
GCGCTGCACCCGCGCCTCGACGTGCTGGTGTCGGCCGGCCGCGACGGCACCGCGCGCGTG
TGGGACGTGCGCAGCAAGGCCAACGTGCACACGCTCGCCGCGCACACCGACACCGTCGCC
TCGCTCGCCTGCCAGGCCGCCGAGCCGCAGATAATAACCGGCTCGCACGACTCGACCATC
CGTCTCTGGGACCTGGCGGCCGGCAAGTCCGTGTGCACGCTGACCAACCACAAGAAGTCC
GTTCGCGCGATCGTGATACACCCGACAATGTACACGTTCGCGTCGGCCTCGCCCGATAAC
ATCAAACAGTGGAAATGTCCCGAAGGAAAATTTATACAAAACCTGTCTGGTCACAACGCA
ATAGTGAACTGTCTGGCCGTAAACCCCGAGGGCGTGCTGGTGAGCGGCGGCGACAACGGC
ACCATGTACTGCTGGGACTGGAGGACCGGCTACAACTTCCAGAGGTTGCAGACGGCGGTG
CAGCCCGGCTCCATGGACTCGGAGGCCGGCATCTTCGCCATGAGCTTCGACCAGTCCGGC
TCCCGCCTCATCACCGCCGAGGCCGACAAGACCATCAAGATCTACAAGGAGGACGAGGCG
GCCTCGGAGGAGACTCACCCGGTCAACTGGCGACCGGAAATATTGAAGAGGCGAAAGTTT
TAGGAACAATAAAATATTTTTATACGCAATTGTTATTTGGACAGCCCACTGAGTTTCACG
CCGAATCTTCTCAGTGGGTCGC
(1642 bp)

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