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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c29477_g1_i3
Scaffold_idBomo_Chr1
NCBI non-redundant
(nr)		protein_AF-10_isoform_X16_[Bombyx_mori]
Ontology
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046872 F metal ion binding
Transcript
Level		FPKM:0.48 TPM:0.37
ORF EntryO_BomoASG16485_complete:A_BomoASG_c29477_g1_i3
Sequence
(Nucleotide)
CGTAAGCCTTCAATTAATAAAGGATTATTTTCTCGTGCCATCGAAGTAATAATGACGAGT
TCATTATGAAGGAAATGGTCGGAGGATGCTGTGTATGCTCTGACGAGCGGGGTTGGCCGG
ACAACCCTTTGGTCTACTGCGATGGAAATGGATGCACTGTTGCCGTACACCAAGCTTGCT
ATGGAATTGTTACAGTACCAACTGGTCCTTGGTACTGCCGAAAATGTGAGAGTCCTGACA
CAAAGGGAAAAGTTAGATGTGAGCTTTGCCCATCAAAATCGGGCGCATTAAAACGGACAG
ACACAGGTGGATGGGCGCACGTTGTATGCGCCCTCTACATACCAGAAGTACGATTTGGAA
ATGTTACTTCTATGGAACCTATTGTTCTCAGACTCATACCACCTGAGCGTTACAACAAGA
CATGCTACATTTGCCATGATCTGGGCAAGTCTCATAGGGCAACTGCAGGCGCTTGTATGC
AATGCAACAAATCAGGATGTAAACAGCAATTTCACGTGACTTGCGCCCAAAGTTTGGGCT
TCCTATGTGAAGAAGCAGGCAACTATCTCGACAACGTCAAGTACTGCGGCTACTGCCAAC
ACCACTACAGCAAATTGAAAAAGGGTGGCAATGTGAAGACTATTCCGCCGTACAAGCCAG
TCCCTCATGACAGTCACTCGAGTGACTCGAGCTGCGAAAAGGAGGGCGGTAACTCTCCTG
TGACCACCGGAAGTGTCACGCCAACACATGCTGGCAAATCTAAAGGGCCCGGACGCAAAT
CGTCGCACGCTAGTGGCTCAGGTTCTGGCAAAAACGCTCCTTCAACATCGAAGGCTTCGA
CTAGCACCGTTCAGCCTATGGACAAAAAGAAGCCGTCGCCTTCACGGCGTGGCTCGTCAG
CCGGTGACGCAGGCGGTTCTGGAAGCAAATCGAGCACCCCGGCGCCGTCACCTCAACACT
CTGCAGAAACATCGCAAACTCAAAGCGCTAAAGCGGGTGGTTCGACCCCTAAAGCACCGC
CGCCGCCAGCCTCGCCGAGCGGTTCCAAGCCTCCCGAACCAGTGGGAGTCATAAGCTCGG
TAGCGTCTGCTACTGCGACCCCCGTGTCCACAATTACTGCTCCAGCTAGTGCTGCGGTAT
CGACGTCTGTGGTACAAATACCTCTGCCGAAGCCGACTTACCAAGAGACAGTAATCACGA
ACACTGAAGCGATGGAAACGAAACAAACGAAAAAGCGTAAAGCTGTAGCGAGCGCTGCAG
CTGCTGCCGCCGCAGCCGCCGCCGCCGCGGCCGCTGCCAATGCGGCTCTAGACTACGGAC
CGAGTACTTCATCAGCCATGTTGGATGCTAACGGTAACATACCGGGCGGCTGTAATTGGG
AGGCGGGGCCCTCGTGTTCTTCAGAAATGCAAGAACATGAAAAGTACATCAAAAAGGCTA
AGACGGATCATCCCGAGCCTCTGAACATGCAGAGCCACTACAACCCGATTGCACCACCAC
CACCGCCTCCGCCACCAGCCCACAGCCCTGCTTCTCAACCGAGCCCTAGGTACCATCACA
GACACCTGCCGAGCCCAATGCCTGGCCCGAGCGGTCTGAATCCTGTATCGACTATACGAT
CGCCTTCACAGCCTCAGGTTTCGGTTCAATCTGAAATTCCTGGTCCATCGCAGCATATTT
TCCATCAGCCACAACCACAAAAGCCAACTTCTATGGAACAGCCTGGCGTCTCAGGGCATT
CACCGCATACCGTTCCTGGTCGCTCTTCTTGGGGTGGTCTGAACGTTGCCTACGAAATGC
AGCAAGATCCAAATAAACCAGGTGTCAGTGGGATGGCCAGTACTAGCAAAGACAATATGG
GCCCGGTTCCCATATGCCCGATGCCGCCGGCTATCAGGAACAAGAAACGAGCAGCGATGG
CGTCTGTCGTCAACATGGCGCCGGCTCCTATGCTTCCTGGTCCTTCCGGTCCTCCATGTC
CACCAGGACCGTCTGCAATACGTACAGAACGCGCCATGAAACCGAAAATGGAAACAAAGA
TTGGCCCGAGTTGTACAGCGCCGCACATGCTCGGCAACGAATTGAATCCGGAAAGTGGGG
CTGCGGCCCGGCTTCAAGAGCAACTGAGCGCCGAGCTGGCCGCACATGCCGCCGGGAGCG
GTGGTCCAGACCCACTGATTCCGCCACCGCTCATCAACAAGGCCGGAACAGGTGCTGGAG
GCCCAGCGGGACGTAGTTCTTCGAGTGCTCAGAGCCTCGATCAGCTGCTCGAGCGTCAGT
GGGAGCAGGGATCGCAGTTTTTAATGGAGCAAGCCCAGCACTTCGATATAGCATCACTAC
TCTCATGCCTGCACCAGCTCCGCACGGAGAACGTGCGTCTGGAGGAGCATGTGGGTAGTC
TGCTACAGCGTCGTGACCATCTGCTTGCAGTGAACGCTCGTCTCGCGATACCTCTCACCG
CCATGTCTGCGGGTCCCCCCGAACCACCAAGATGCGCCCGGGACAGCGGGTCCCAGATGC
GCGGCCCGCCACCGCCTGTACGCGCCACCGAGACCATCACCTCTGACCGGTCCCACCAGC
TTATGATGCGTGATATGCAACAAAAGCCCAG
(2611 bp)

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