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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c29383_g1_i2
Scaffold_idBomo_Chr13
NCBI non-redundant
(nr)		cysteine--tRNA_ligase,_cytoplasmic_[Bombyx_mori]
Ontology
GO:0000049 F tRNA binding
GO:0000166 F nucleotide binding
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004817 F cysteine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005737 C cytoplasm
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006423 P cysteinyl-tRNA aminoacylation
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
Transcript
Level		FPKM:16.58 TPM:12.72
ORF EntryO_BomoASG16232_complete:A_BomoASG_c29383_g1_i2
Sequence
(Nucleotide)
GAAAATTTCATGTTACACATATGTACCGTATAAAGTAAAATTTTCACAGTAATTCTTATT
TTACGCTCACCTGGTTCAATGTGATGAAATAAAACGTAGGTTGTACCTACGTGGCGAGAA
CAATTTAAAAATTATTAATAGAAATAAATACTTTTGTCTAGTAAGGTTACGTTAAATTTT
ACGTTAGACTTAAGCAAGAAAATCACATTTTTTTAATAGTTCTAACAATTAAAAATGTCT
AAAAGAAGTCAACCTGCTTGGTCACCTCCGGTTCGAAACAAGGAGCGACCAGTTTTAAAA
CTTTACAATAGTTTGAGCCGACAAAAAGAAGAATTCATACCCGCTAATGGTAATCGTGTC
AACTGGTACAGCTGCGGCCCTACAGTCTACGATGCATCTCACATGGGACATGCGAGATCT
TATATGTCATTTGACATACTCAGGAGGGTAATGGCTAATTATTTTGGATATGATATTTTA
TATGTCATGAATATAACTGATATAGATGATAAAATAATTAAAAGAGCCAGACAAAAATAT
TTATATGAAAAATATTTAAAAGAACCACGAAACCTTAACGACACCGTTGATGATGCAGTC
AACGTTATAAATTACTATGAGGAAGCTGTAAAAAATGCAGAAGATCCAGATAAAAAAAAA
TTGATGCAGAAAACATTGGATGAGATTGCGGCCTCAGTAAAAGCCCTTAAAGTTGCTATT
GAATCAAAAGACAATGAAAGGATTAAGAATTCAAGATGTGATTTATTAACATCAGCAAAG
AGTCCAATCTCTGACTGGTTAGATTACAAATATGGAGAAACTGTTACAGACAATGCAATA
TTCACAACTCTACCTAGGTATTGGGAAAATGAATTTCATAAAGATATGAAAGCACTTAAT
GTATTACCACCGGATGTACTGACAAGAGTAAGTGAATATGTCCCTAAAATAATTGCATAC
ATACAAAAGATTATTAGCAATGGTTTTGCATATGAATCAAATGGCTCTGTATATTTTAAT
GTGAGTGAGTTCGATGGAAATGAAAGGCATCATTATGCAAGATTAGTGCCTGAGGCATAC
GGTGATACTAAATCGTTGCAAGAAGGAGAAGGTGATCTAACTGATGATGCAGCAGAAAAG
CGATCACCCAACGACTTTGCTCTATGGAAGCGTAGTAAAGCTGGCGAGCCATCATGGGAT
TCCCCATGGGGGGCAGGTCGACCCGGGTGGCATATAGAGTGTTCCGCAATGGCTTCGGAT
GTTTGCCAAAATAAACTTGATATACACACAGGGGGCGTCGATTTAAAATTCCCTCATCAT
GACAACGAATTGGCCCAGAGCGAGGCACATTTCGACGAGCCCGGTTGGGTTAATTATTTC
CTTCACACGGGACATTTGATGATAGCTGGCTGCAAAATGTCGAAATCTTTGAAAAATTTC
ATCACGATCTCAGACGCACTGAAACGCCACACCGCAAGACAACTGCGGTTCGGTTTCCTG
CTACACGGATGGAAGGAAACTTTAGATTACTCGGAGAATACAATGGAAATGGCCATTCAG
ACAGAAAAACAATTTAACGAATTCTTTTTGACAGTGAAAGATGCTCTTCGTAGCGGCTAC
GACGAGGGTTGCGGCGGTGGATGGGAACCGGAGGAACAGCGGCTGTTTGCTAAACTGTCA
ATGGCCAAGGAACAAGTTCACGCGGCACTCTGTGACAACATCGACACCCGCGGCGCCATC
GACGCCTTGCGGGAGCTGGTGTGCGCGTGCCACGTGTACCTGCGCGGCGCGCGGGCGCGG
CCCAGCCCCGCGCTGGCGGCGGCGGCGCGCTACGTCACGGACGTGCTGCACGTTTTCGGC
GTCGTCGAGGGACCCAGGGGCGGCATCGGCTTCCCGGTCGGAGACGCTGATGGTGTTTCG
TTGGAAGAGACGGTGATGCCGTACCTGGAGGCGCTGAGTGCGTTCCGCGAGCGGGTGCGC
GAGGCGGCGCGCGCGGGGCAGGGCGGCGCCGTGCTGGCGCTGTGCGACGCGCTGCGGGAC
CGCGTGCTGCCCGACCTCGGCGTGCGCCTCGAGGACAAGCCAGATCGGACAGTCGTAAAA
TTGGTCAGCAAAGAGGAACTGTTAAAGGAGAGAGAAGAGAAGAAGCGTTTGGAAGCAGAG
AAGCAAAGAAAGAAACAGGAGTTACTCGAGGCGCAACGTTTGAAGGAGGAACAAAAGAAA
ATATCACCCGCCGAAATGTTCAGGAAGGAAACTGACAAGTATTCGAAGTTCGATGAAAAG
GGTCTACCCACGCACGACCACGAGGGTAAGGAGTTGAGTAAGGGTCTCCTAAAAAAGCTG
CAGAAACTACAACAAGCACAAGAGAAGAAATATAACGAGTATTTAACTTCTATAAATACT
TGCTGACGTCGGACTGTGTATTTTTTAATGATTTTTTTTATTTTCCATTATTGTATTCTT
TGCATTTTTTAAGTAAGATATATAGGTCTAATCACTTCTCTTTTATTTTCTATGAAGGAT
ATTTCCAACAGTGCTCAAAATATAGTATTTATATTCAATTTAGTCTATGTTGCTTTATGT
CTAATACTCGAGTTTTTGTTTAATGTCTTGATTTAATTTTAATTAGGAAACGTTAAAAAA
AATGCCGCTTTTTTCTATTAAAATTAACTTGTGTTAACTAAAAGGAGAACCTTGTATTTT
GCCGTCGGAGCTCAGTATTAAGACTTGTTTTTTGCACGTTGTTTCCATTATTTGTATAAA
TTGCAACAAATAAACAAGATAAAAATAAAAAAAAAAAAAA
(2800 bp)

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