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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c29374_g1_i3
Scaffold_idBomo_Chr19
NCBI non-redundant
(nr)		E3_ubiquitin-protein_ligase_Nedd-4_isoform_X3_[Bombyx_mori]
Ontology
GO:0002092 P positive regulation of receptor internalization
GO:0004842 F ubiquitin-protein transferase activity
GO:0005112 F Notch binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005886 C plasma membrane
GO:0007219 P Notch signaling pathway
GO:0007275 P multicellular organism development
GO:0007411 P axon guidance
GO:0007528 P neuromuscular junction development
GO:0016199 P axon midline choice point recognition
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0017022 F myosin binding
GO:0019904 F protein domain specific binding
GO:0031623 P receptor internalization
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0045746 P negative regulation of Notch signaling pathway
GO:0045807 P positive regulation of endocytosis
GO:0051965 P positive regulation of synapse assembly
GO:0061630 F ubiquitin protein ligase activity
Transcript
Level		FPKM:1.06 TPM:0.81
ORF EntryO_BomoASG16209_3prime_partial:A_BomoASG_c29374_g1_i3
Sequence
(Nucleotide)
AGACGTGTGCTCTTCCGAATCTTTTTATCGTGCCCACTTCTTGAAGATAAGATAAAAATG
TCATTTGTGTCTCTTCGTTGCAACTATAGAGCCGTTTTTAGTTATCGTTTTTTCTCGTTA
TTTTAACATTTTTGTGATGTAAAAAGTGGAAATGAAAAGTGATGAGGTGTTTGTATGCAG
TTTTTTTGAGAAATGTTAGATTCACGTACGGTTGCAGTGATGCATAACGCTAGGCCTCTC
GATGTTGCTGAAACAGGTGAACGTCACAGAAATCGGTCATCATCGTGGACGTCAAGGCGA
TGGCAAAATGGTCTTTTCAGACAGGAACCAAGATATTCACTGCAATGTCAGACTGATGAG
AACAGCTTCCTGCTTCGTCTGAAGATAATAGGAGCTAATTCATTGGCGAAAAAGGATATA
TTTGGTGCTAGCGATCCATATGTCCGCGTCGAGCTGCAGAAGGTGGACGGTGACGTCACG
ATTGAAACATTCCTTACTAAGACGAAGAAAAAGACATTAAATCCAGTATGGAATCAGGAG
TTTATATTTCGGGTGAAACCTCAAGAGCACAAGCTGCTGATACAAGTGTTCGACGAGAAC
CGTCTGACGAGGGACGACTTTCTGGGCATGGTCGAGGTGCCCCTGGGGTCCGTGCCGGCC
GAGTCGGCGGCCAGCGCTCGGCCCAATGTCGTTAAGTACCCGTTGCGACCGCGCAGGTCC
GTTGCAAGATCGAGAGTGCGTGGCTACATCGAGGTGTACCACGCTCTGGTCGGCAGAGTA
GGTGATCCCGCCACGGACGAGGCCGCCAACCGCACCGCCGACGACTGGGAGATGGTGGAG
CCTATCAACCAAGTCGGAACCGTGCAACCGACGATAGGAGGCGACGCTTTGCCGCCGGGC
TGGGAAGAGAGACAGGACGCTAATGGCAGAACGTATTACGTGAATCACATTGAGAGGACC
ACGCAATGGGAAAGACCAACTTTCACTCGTCACATGAGCGTGGAGTCCCAGGCCGAGAGG
ATAGAGAACGCCGCCACCGAATTCCAGAGGCGGTTTCACATCTCGGCAGACGAGGAGCGA
GCCTCCAGCCCGGCGCCTGCGCCCCAGCAGGGGGATGTAAACAGTACGAACTCGGAAGTG
ACGTCAGCCGAAGAAACCCCGTTCGCCACGCCCGATAGGTCGCCGGAATTGAGGAGAAAC
GAAAACGAACCAGAGCCAAGGATAGCGACTAACATTAGTGTAACCGACTGTGATAATATT
GATAGTAGTTTAAGCAATAATGATACAAGAGAAGACGACGACGTTGTCTGCGCTAATGAG
ATTAGCAGGGACGAAGCTGTCAATGAGACGGTCAATACGGAAGCCGATGAGACAGAAAGA
GACGGAAACAACACAAACGCTCAAGACGACGCAGACGATAACGATCAGGCTAGTCAAGAC
ACCGTCGACAATGGAAACGTTCTACAGCAAACCGAGAACAATGGAAACGATCTTAACGAT
GAAACAACGAACGAAGCGCGCAGCGAACAACCAGTTATAGAAGACACGTTGACGTTCGAC
GAGAACCACTTTAGTACGCCGACAGGCGGGGTCTCTCCGGAGAGGTCGCCGCGGACACGA
CGCCGGAGGACCACGACCAGCTCGATGGAGGACTCGGAGGACGAGACCGATGGCTCCACC
GAAAGCACGAGGAGTAGCGCCAGCAGCAGCCAGAGTCAGAACTTGCCCAGCAGTGAAGGC
TTACCTCCTGGTTGGAGTATGCAGAGAGCGCCCAACGGCAGGATATTCTTCATTGACCAC
AACAAGAAGACCACCACGTGGATAGATCCCAGAACCGGTTGCGCGTCCAGCCTGCCCAGC
GCGGAGGCGGGCGG
(1874 bp)

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