SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c29357_g1_i3
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		putative_Copia_protein_[Danaus_plexippus_plexippus]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0004190 F aspartic-type endopeptidase activity
GO:0005524 F ATP binding
GO:0006508 P proteolysis
GO:0008233 F peptidase activity
GO:0008270 F zinc ion binding
GO:0015074 P DNA integration
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
Transcript
Level		FPKM:5.26 TPM:4.03
ORF EntryO_BomoASG16164_5prime_partial:A_BomoASG_c29357_g1_i3
Sequence
(Nucleotide)
ATTTAAGATTAAAGACTTAGGACAGTTAAAACAATGCTTAGGCATTAGAATTCAAATGTA
TAAAAATGGTTCCATTTCACTAGATCAAAAACATTTTGTGGATTACATATTAAATAAATT
TAATATGACAAATTGTAATGGTGTTGATACACCAATTGAGAATAATTTAAAGCTAGAGAA
AAGTGTTGATGTTTGTAAACAATACCCATTTCAACAATTAATAGGAAGCTTAATGTATTT
AAGTGTCTTAACTCGCCCAGATATATCTTATAGTGTAAGTTTTTTGAGCCAATTTAATAA
TAGTTATTCACTTATACATTGGAAACATGCAAAACGAATTTTGAGATATTTAAGCAAAAC
TAAATCTTATGGGCTTATGTTTACTAAAGATGATTGTAACTTAGAGGGTTTTGTTGATGC
AGACTGGGCCTCAAATACTGTAGATAGAAAATCTTATACAGGTTTTTACTTTAAGTTTTC
AGGATCTGTTATCTCATATGAATGTAAAAAACAGCAGACTACAGCCCTATCTAGTACAGA
AGCTGAATACATGGCGATAACCGAGGCTTGTAAAGAGGCAATATATTTAAAGAACTTGTT
GAATGAGATTGTAGATTTTTGTAATTATACAATAACCTTGTACAACGACAATCAAGGGGC
TCAGAAGTTGACAGAGAATCCAATGTTCCATAAAAGAACTAAGCACATTGACGTGCGTCA
CCATTTTGTTAGAGAAGCAGTTGCTAACAAACATGTAAAAATAGTTTATCTGCCAACATC
TGAAATGCCTGCAGACCTGTTAACAAAGGGCTTGAGTAGTGTCAAACATAGCTATTTTGT
TAAGAAGCTAGGCATGCATATTATTGTGTGATTTATAAAAAAAAAAATATATATATTTTA
AG
(902 bp)

- SilkBase 1999-2023 -