SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoASG_c29328_g1_i1
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		DNA-directed_RNA_polymerases_I_and_III_subunit_RPAC1_isoform_X1_[Bombyx_mori]
Ontology
GO:0000183 P rDNA heterochromatin assembly
GO:0001054 F RNA polymerase I activity
GO:0001056 F RNA polymerase III activity
GO:0003677 F DNA binding
GO:0003899 F DNA-directed 5'-3' RNA polymerase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005666 C RNA polymerase III complex
GO:0005736 C RNA polymerase I complex
GO:0006351 P transcription, DNA-templated
GO:0006361 P transcription initiation from RNA polymerase I promoter
GO:0006383 P transcription by RNA polymerase III
GO:0008150 P biological_process
GO:0034587 P piRNA metabolic process
GO:0046983 F protein dimerization activity
Transcript
Level		FPKM:11.69 TPM:8.97
ORF EntryO_BomoASG16083_3prime_partial:A_BomoASG_c29328_g1_i1
Sequence
(Nucleotide)
CGTGTGCTCTTCCGATCTTATGATCACTACCTTACGTAAAATCATCGAAATATTTAATTT
TGTCAATTATATCTGTATAAAAATATGCGACAAACTTTATATACAGTAAACGTTACTGTA
TACCTGTGAAATAAGATAAAACCTTATTTACATTAATTAGTAAAATATTGCAAAAATGCC
TAAATTCGATGAAAAACCCCGAGTTTTTCTTGAAGAATTCCGTGTTAAGAATGCACCCGA
AGATTACGGATTAGACGATGAAACATGGGACTTCAAAAAGTTTGTGAAGAAGTTTAAGAT
AGTTGTAGTACGAATGGACAATTTCGAAATGGAATTTGACTTGATTGGGATCCAGCCAGC
ATTTGCGAACGCATTCCGGAGACTCATGTTAAGTGAAGTTCCTAGTATGGCTATTGAAAA
AGTAATGATCAAGAACAACACTTCTATAATACAGGATGAAGTTTTAGCACACAGATTAGG
ATTGATTCCTCTCAAAGCTGATCCAAGATTGTTTGAATATAAATCTGAAGAAGACACGGA
AGGAACAGAATTCAACACTTTAGAATTTTCACTAAAAGTAAAATGTACCAATAGCAAGTC
ACAACCAAAAGATTCATATAGAGCTGAAGATTTGTATGAAAATCATAGTATTTATTCATC
CCATATGAAGTGGCATCCAATTGGCAACCAAGCTACAGTTTATAAAGAAGCTGATGTGGG
TCCTGTACATAAGGATATTCTTATATCAAAAATGAGACCTGGCCATGAAATAGACCTTCA
AATGATTGCCGTGAAGGGCATAGGAAAGGATCATGCAAAATTTTCACCTGTTGCAACAGC
TACATACAGATTGCTGCCAGAGGTAACACTGACTCGTGAAGTTTGTGACAGTGAAGCCAC
ACTGTTGCAGAGTTGTTTCTCACCAGGTGTTATTGGTATTGACTCTAAAAACCGAGCATA
TGTGAAAGATGCAAGATATGATGCATGTAGTCGTAATGTTTATAGATATGACACAATCAA
AGATTCAGCAATCCTAAGTAGAGTTCGGGATCATTTCATATTTAATGTGGAATCAGTTGG
AGCAATTCCACCTCAGATAATTT
(1103 bp)

- SilkBase 1999-2023 -